RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 ECSCRQ19T08 205 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 GPR148Q8TDV2 347 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 TMEM106AQ96A25 262 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 LGALS12Q96DT0 336 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 RITA1Q96K30 269 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 MRPL20Q9BYC9 149 aaKnown RBP11.9□□□□□ -0.5
RPUSD3-204ENST00000424438 ALMS1Q8TCU4 4167 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 H3BUA1 57 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 RRHO14718 337 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 RBBP9O75884 186 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 RGS11O94810 467 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 ARSBP15848 533 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 CD40LGP29965 261 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 GBX2P52951 348 aaPredicted RBP11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 CCDC58Q4VC31 144 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 OR10V1Q8NGI7 309 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 OR1L1Q8NH94 360 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 RNF5Q99942 180 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 RANGRFQ9HD47 186 aaPredicted RBP11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 OR2S2Q9NQN1 319 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 ETAA1Q9NY74 926 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 TAS2R4Q9NYW5 299 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 ING4Q9UNL4 249 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 LRRC42Q9Y546 428 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 AP4S1Q9Y587 144 aa11.89□□□□□ -0.51
RPUSD3-204ENST00000424438 E9PI62 339 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 GPX5O75715 221 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 BRI3O95415 125 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 FADS2O95864 444 aaKnown RBP11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 TFAP2AP05549 437 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 SERPINA2P20848 420 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 BDKRB2P30411 391 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 PPP3R1P63098 170 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 ACTBL2Q562R1 376 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 DDI2Q5TDH0 399 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 LHFPL3Q86UP9 236 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 GTSCR1Q86UQ5 136 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 RGP1Q92546 391 aaPredicted RBP11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 SLC7A6OSQ96CW6 309 aaPredicted RBP11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 CENPNQ96H22 339 aaPredicted RBP11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 ISG20L2Q9H9L3 353 aaKnown RBP11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 TAF9BQ9HBM6 251 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 ERVK13-1Q9NX77 482 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 RYR1P21817 5038 aa11.88□□□□□ -0.51
RPUSD3-204ENST00000424438 OR5H14A6NHG9 310 aa11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 RCC1P18754 421 aaPredicted RBP11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 ADARB1P78563 741 aaKnown RBP11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 LCN12Q6JVE5 192 aa11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 AMIGO2Q86SJ2 522 aa11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 PPP1R27Q86WC6 154 aa11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 OR2K2Q8NGT1 345 aa11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 OR4K15Q8NH41 348 aa11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 HIPK2Q9H2X6 1198 aa11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 MRPS18AQ9NVS2 196 aaKnown RBP11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 CNOT2Q9NZN8 540 aaKnown RBP11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 OAZ3Q9UMX2 235 aa11.87□□□□□ -0.51
RPUSD3-204ENST00000424438 IGFBP3P17936 291 aaPredicted RBP11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 MC5RP33032 325 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 TPPP2P59282 170 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 SLC22A6Q4U2R8 563 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 RAB12Q6IQ22 244 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 RPL22L1Q6P5R6 122 aaKnown RBP11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 IL34Q6ZMJ4 242 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 LAX1Q8IWV1 398 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 CDH26Q8IXH8 852 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 Q8N402 240 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 FBXL15Q9H469 300 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 TUBA4BQ9H853 241 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 KCNIP1Q9NZI2 227 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
RPUSD3-204ENST00000424438 SAA2-SAA4A0A096LPE2 208 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 A0A0G2JLM5 398 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 A0A1W2PP11 408 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 SHISA3A0PJX4 238 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 ITGB1BP1O14713 200 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 SPDEFO95238 335 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 IGHV3-11P01762 117 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 ALPLP05186 524 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 SAA2P0DJI9 122 aaPredicted RBP11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 GABRB1P18505 474 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 FUT3P21217 361 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 SOX2P48431 317 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 GNMTQ14749 295 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 UNQ5815/PRO19632Q6UWF5 114 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 HAPLN4Q86UW8 402 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 PRR18Q8N4B5 295 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
RPUSD3-204ENST00000424438 PPP1CCP36873 323 aaKnown RBP11.84□□□□□ -0.51
RPUSD3-204ENST00000424438 MECP2P51608 486 aaKnown RBP11.84□□□□□ -0.51
RPUSD3-204ENST00000424438 RIPK1Q13546 671 aa11.84□□□□□ -0.51
RPUSD3-204ENST00000424438 C6orf141Q5SZD1 244 aa11.84□□□□□ -0.51
RPUSD3-204ENST00000424438 FAM131AQ6UXB0 335 aa11.84□□□□□ -0.51
RPUSD3-204ENST00000424438 OR2AK2Q8NG84 335 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms