RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 ERVFRD-1P60508 538 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 PAX5Q02548 391 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 KRBOX4Q5JUW0 171 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 TMEM65Q6PI78 240 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 ZNF546Q86UE3 836 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 ZNF561Q8N587 486 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 MOB3AQ96BX8 217 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 RIMS4Q9H426 269 aaPredicted RBP7.41□□□□□ -1.22
HPS4-204ENST00000422379 ZNF665Q9H7R5 613 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 MBNL3Q9NUK0 354 aaKnown RBP7.41□□□□□ -1.22
HPS4-204ENST00000422379 TNFSF18Q9UNG2 199 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 ZFHX3Q15911 3703 aa7.41□□□□□ -1.22
HPS4-204ENST00000422379 TEX13DA0A0J9YY54 714 aaPredicted RBP7.4□□□□□ -1.22
HPS4-204ENST00000422379 C12orf77C9JDV5 145 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 DVL1O14640 695 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 FSTL3O95633 263 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 IFNA7P01567 189 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 SSTR5P35346 364 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 MDH2P40926 338 aaKnown RBP7.4□□□□□ -1.22
HPS4-204ENST00000422379 AP2S1P53680 142 aaPredicted RBP7.4□□□□□ -1.22
HPS4-204ENST00000422379 P2RX3P56373 397 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 SLC35E4Q6ICL7 350 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 LDLRAD3Q86YD5 345 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 SGPP2Q8IWX5 399 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 OR8H3Q8N146 312 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 MRGPRDQ8TDS7 321 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 NMES1Q9C002 83 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 BPESC1Q9GZL8 116 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 PARP12Q9H0J9 701 aaKnown RBP7.4□□□□□ -1.22
HPS4-204ENST00000422379 C19orf12Q9NSK7 152 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 KAAG1Q9UBP8 84 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 UBQLN2Q9UHD9 624 aa7.4□□□□□ -1.22
HPS4-204ENST00000422379 IGHV4-30-2A0A087WSY4 118 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 RPS10-NUDT3A0A1W2PQS6 291 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 TMEM30CPA0ZSE6 113 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 ODAMA1E959 279 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 RNF222A6NCQ9 220 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 C15orf65H3BRN8 121 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 H7C1Q1 480 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 MGST3O14880 152 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 PPYP01298 95 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 HOXB5P09067 269 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 CGB3P0DN86 165 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 CGB7P0DN87 165 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 PAX1P15863 534 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 UCP3P55916 312 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 ATP5J2P56134 94 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 TMEM33P57088 247 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 HERV-K104P61576 105 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 PHLDA2Q53GA4 152 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 OR1L1Q8NH94 360 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 OR10C1Q96KK4 312 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 NAA60Q9H7X0 242 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 METTL8Q9H825 291 aaKnown RBP7.4□□□□□ -1.23
HPS4-204ENST00000422379 SLC2A9Q9NRM0 540 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 MBD2Q9UBB5 411 aa7.4□□□□□ -1.23
HPS4-204ENST00000422379 SLC25A10Q9UBX3 287 aaPredicted RBP7.4□□□□□ -1.23
HPS4-204ENST00000422379 FLNAP21333 2647 aaKnown RBP7.39□□□□□ -1.23
HPS4-204ENST00000422379 KIR2DS1A0A191URI9 304 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 TRDCB7Z8K6 153 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 BET1O15155 118 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 PHF1O43189 567 aaPredicted RBP7.39□□□□□ -1.23
HPS4-204ENST00000422379 WNT2P09544 360 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 PSMB6P28072 239 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 IL2RGP31785 369 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 KIR2DS4P43632 304 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 EDDM3BP56851 147 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 CYCSP99999 105 aaKnown RBP7.39□□□□□ -1.23
HPS4-204ENST00000422379 ZNF273Q14593 569 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 KIR2DS1Q14954 304 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 ABCA11PQ4W5N1 156 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 SLC38A6Q8IZM9 456 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 PRR18Q8N4B5 295 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 THAP6Q8TBB0 222 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 PCNPQ8WW12 178 aaKnown RBP7.39□□□□□ -1.23
HPS4-204ENST00000422379 C17orf50Q8WW18 174 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 RTN4IP1Q8WWV3 396 aaPredicted RBP7.39□□□□□ -1.23
HPS4-204ENST00000422379 KIRREL1Q96J84 757 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 RSRP1Q9BUV0 290 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 GSX2Q9BZM3 304 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 DNTTIP1Q9H147 329 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 TAF9BQ9HBM6 251 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 OR1A1Q9P1Q5 309 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 TRAPPC2LQ9UL33 140 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 ARHGAP32A7KAX9 2087 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 DSCAML1Q8TD84 2053 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 BAHCC1Q9P281 2608 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 CREBBPQ92793 2442 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 A0A0D9SG52 128 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 NKX6-3A6NJ46 265 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 VWC2LB2RUY7 222 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 F5H0A9 414 aaPredicted RBP7.39□□□□□ -1.23
HPS4-204ENST00000422379 H0YIZ8 118 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 MMP23AO75900 390 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 OR2F2O95006 317 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 OR5AC1P0C628 307 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 NDUFB7P17568 137 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 OMGP23515 440 aa7.39□□□□□ -1.23
HPS4-204ENST00000422379 GPR6P46095 362 aaPredicted RBP7.39□□□□□ -1.23
HPS4-204ENST00000422379 KCNJ3P48549 501 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms