RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 LRP11Q86VZ4 500 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF610Q8N9Z0 462 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 TCTEX1D2Q8WW35 142 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 C12orf57Q99622 126 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 TAAR3PQ9P1P4 343 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SPG11Q96JI7 2443 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SMCO3A2RU48 225 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SMPD2O60906 423 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SELLP14151 372 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 RAB13P51153 203 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 HLA-DRB3P79483 266 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SCGB1C1Q8TD33 95 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF665Q9H7R5 613 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 PSG11Q9UQ72 335 aa11.29□□□□□ -0.6
MCF2L-213ENST00000421756 SPRY3O43610 288 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 CA11O75493 328 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 CDS2O95674 445 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 IFNA5P01569 189 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 TNFSF10P50591 281 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 ARL16Q0P5N6 197 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 NINJ1Q92982 152 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 OR51I2Q9H344 312 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 OPN1MWP04001 364 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 FTH1P19P0C7X4 201 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 OPN1MW2P0DN77 364 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 OPN1MW3P0DN78 364 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 NCMAPQ5T1S8 102 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 ZCCHC24Q8N2G6 241 aaKnown RBP11.28□□□□□ -0.6
MCF2L-213ENST00000421756 NECAP1Q8NC96 275 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 MDS2Q8NDY4 140 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 CCDC54Q8NEL0 328 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 J3QT63 122 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 HAND1O96004 215 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 TUBG1P23258 451 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 TAGLN2P37802 199 aaKnown RBP11.28□□□□□ -0.6
MCF2L-213ENST00000421756 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 RND3P61587 244 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 ZNF266Q14584 549 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 IER2Q9BTL4 223 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 SMCO4Q9NRQ5 59 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 IL36GQ9NZH8 169 aa11.28□□□□□ -0.6
MCF2L-213ENST00000421756 CD5P06127 495 aa11.27□□□□□ -0.6
MCF2L-213ENST00000421756 Q3ZCU0 254 aa11.27□□□□□ -0.6
MCF2L-213ENST00000421756 LINC00470Q9BZP3 86 aa11.27□□□□□ -0.6
MCF2L-213ENST00000421756 SLC25A31Q9H0C2 315 aa11.27□□□□□ -0.6
MCF2L-213ENST00000421756 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.6
MCF2L-213ENST00000421756 DECR2Q9NUI1 292 aa11.27□□□□□ -0.6
MCF2L-213ENST00000421756 KCNIP1Q9NZI2 227 aa11.27□□□□□ -0.6
MCF2L-213ENST00000421756 PRELID3BQ9Y3B1 194 aa11.27□□□□□ -0.6
MCF2L-213ENST00000421756 M0R1B8 84 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 SH2D1BO14796 132 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 GAPDHP04406 335 aaKnown RBP11.27□□□□□ -0.61
MCF2L-213ENST00000421756 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 UBE2KP61086 200 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 DRAM1Q8N682 238 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 MPC1Q9Y5U8 109 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 WSB1Q9Y6I7 421 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 SULT1A1P50225 295 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 ZNF324BQ6AW86 544 aaPredicted RBP11.27□□□□□ -0.61
MCF2L-213ENST00000421756 ZNRF1Q8ND25 227 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 GNG12Q9UBI6 72 aa11.27□□□□□ -0.61
MCF2L-213ENST00000421756 CARHSP1Q9Y2V2 147 aaKnown RBP11.27□□□□□ -0.61
MCF2L-213ENST00000421756 C1orf196B1AJZ1 125 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 PTBP3O95758 552 aaKnown RBP11.26□□□□□ -0.61
MCF2L-213ENST00000421756 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 GCH1P30793 250 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 KIAA0141Q14154 515 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-213ENST00000421756 KRTAP27-1Q3LI81 207 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 SPRNQ5BIV9 151 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 Q6ZR03 302 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 NANPQ8TBE9 248 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 TMEM204Q9BSN7 226 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 LYRM2Q9NU23 88 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-213ENST00000421756 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 PTPRQQ9UMZ3 2332 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 RBFOX3A6NFN3 312 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 MMP9P14780 707 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 RPL30P62888 115 aaKnown RBP11.26□□□□□ -0.61
MCF2L-213ENST00000421756 FAM214BQ7L5A3 538 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 FGFRL1Q8N441 504 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 PBDC1Q9BVG4 233 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 SLC25A22Q9H936 323 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 PARD6AQ9NPB6 346 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 OR5B21A6NL26 309 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 CEBPZOSA8MTT3 80 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 MLNRO43193 412 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 IGKV1-5P01602 117 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 RAC2P15153 192 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 FLI1Q01543 452 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-213ENST00000421756 Q6ZSR3 168 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 SLC35B3Q9H1N7 401 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 KPTNQ9Y664 436 aa11.26□□□□□ -0.61
MCF2L-213ENST00000421756 CLEC18AA5D8T8 446 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
MCF2L-213ENST00000421756 LINC01387J3KSC0 135 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms