RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ZNF69Q9UC07 566 aa12.79□□□□□ -0.36
DDX55-203ENST00000421670 ODF3BA8MYP8 253 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 YPEL1O60688 119 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 FSHBP01225 129 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 CTXN2P0C2S0 81 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 IL7P13232 177 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 UBE2E1P51965 193 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 PPP5CP53041 499 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 TAS2R19P59542 299 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 ZNF626Q68DY1 528 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 OR2AK2Q8NG84 335 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 OR9G1Q8NH87 305 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 YPEL2Q96QA6 119 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 TSC22D3Q99576 134 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 ABHD14AQ9BUJ0 271 aa12.78□□□□□ -0.36
DDX55-203ENST00000421670 IGHV1-69DA0A0B4J2H0 117 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 J3QR06 171 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 TOR1AO14656 332 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 ST8SIA5O15466 376 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 RGS11O94810 467 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 IGLV1-47P01700 117 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 IGHV1-69P01742 117 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 CD40LGP29965 261 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 SAA4P35542 130 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 DYRK1AQ13627 763 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 KLF9Q13886 244 aaPredicted RBP12.77□□□□□ -0.36
DDX55-203ENST00000421670 RNASE10Q5GAN6 216 aaKnown RBP12.77□□□□□ -0.36
DDX55-203ENST00000421670 CT45A1Q5HYN5 189 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 ZNF57Q68EA5 555 aaPredicted RBP12.77□□□□□ -0.36
DDX55-203ENST00000421670 H1FOOQ8IZA3 346 aaPredicted RBP12.77□□□□□ -0.36
DDX55-203ENST00000421670 TOMM5Q8N4H5 51 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 OR4P4Q8NGL7 312 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 OR4C16Q8NGL9 310 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 CT45A3Q8NHU0 189 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 NANPQ8TBE9 248 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 TAS2R8Q9NYW2 309 aa12.77□□□□□ -0.36
DDX55-203ENST00000421670 ZNF107Q9UII5 783 aaPredicted RBP12.77□□□□□ -0.36
DDX55-203ENST00000421670 FN1P02751 2386 aaKnown RBP12.77□□□□□ -0.37
DDX55-203ENST00000421670 INAFM1C9JVW0 142 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 NPFFO15130 113 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 RAB3DO95716 219 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 CD74P04233 296 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 AKAIN1P0CW23 69 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 FCGR2CP31995 323 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 HLA-DRB5Q30154 266 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 ACTBL2Q562R1 376 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 LDLRAD2Q5SZI1 272 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 SLC25A48Q6ZT89 311 aaKnown RBP12.77□□□□□ -0.37
DDX55-203ENST00000421670 LHFPL4Q7Z7J7 247 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 OR10X1Q8NGY0 326 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 C22orf15Q8WYQ4 148 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 CCDC32Q9BV29 185 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 C11orf54Q9H0W9 315 aaPredicted RBP12.77□□□□□ -0.37
DDX55-203ENST00000421670 MMP28Q9H239 520 aa12.77□□□□□ -0.37
DDX55-203ENST00000421670 SOX21Q9Y651 276 aaPredicted RBP12.77□□□□□ -0.37
DDX55-203ENST00000421670 LINC00854A0A1B0GVQ3 168 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 TBPP20226 339 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 HNF1AP20823 631 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 AADACP22760 399 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 PAX6P26367 422 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 INPP1P49441 399 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 VAX1Q5SQQ9 334 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 LDLRAD3Q86YD5 345 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 BEND2Q8NDZ0 799 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 OR56B4Q8NH76 319 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 ZNF596Q8TC21 504 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 C17orf50Q8WW18 174 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 EDARADDQ8WWZ3 215 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 ABCB10Q9NRK6 738 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 TMEM160Q9NX00 188 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 NUP50Q9UKX7 468 aa12.76□□□□□ -0.37
DDX55-203ENST00000421670 TUSC2O75896 110 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 AMY2AP04746 511 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 OR8U9P0C7N5 309 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
DDX55-203ENST00000421670 PRRX1P54821 245 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 FXYD4P59646 89 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 TSPAN5P62079 268 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 Q3ZCU0 254 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 LY6G6FQ5SQ64 297 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
DDX55-203ENST00000421670 LYG1Q8N1E2 194 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 C8orf31Q8N9H6 132 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 OR8U1Q8NH10 309 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 ABHD14BQ96IU4 210 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 SLC6A7Q99884 636 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 ZNF2Q9BSG1 426 aaPredicted RBP12.75□□□□□ -0.37
DDX55-203ENST00000421670 TOLLIPQ9H0E2 274 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 IFI27L2Q9H2X8 130 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 RNF150Q9ULK6 438 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 OR2W1Q9Y3N9 320 aa12.75□□□□□ -0.37
DDX55-203ENST00000421670 IGKV1D-13A0A0B4J2D9 117 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 BUB1B-PAK6H3BSN5 160 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 PPYP01298 95 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 IFNA6P05013 189 aa12.74□□□□□ -0.37
DDX55-203ENST00000421670 IGKV1-13P0DP09 117 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms