RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OR5D13Q8NGL4 314 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 DCUN1D4Q92564 292 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 ARL11Q969Q4 196 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 FAM234AQ9H0X4 552 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 DNTTIP1Q9H147 329 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 PPIAL4EA0A075B759 164 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 PPIAL4DF5H284 164 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 PGLYRP1O75594 196 aaPredicted RBP17.4■□□□□ 0.38
GPC1-202ENST00000420138 FCN3O75636 299 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 NMBP08949 121 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 PPIAL4FP0DN26 164 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 LYL1P12980 280 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 LUMP51884 338 aaPredicted RBP17.4■□□□□ 0.38
GPC1-202ENST00000420138 TRAT1Q6PIZ9 186 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 C1orf87Q8N0U7 546 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 FGFRL1Q8N441 504 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 RFESDQ8TAC1 157 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 C18orf12Q96KH6 178 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 PPIAL4AQ9Y536 164 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 TRAV38-1A0A0B4J264 116 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 H0YIZ8 118 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 PHF1O43189 567 aaPredicted RBP17.4■□□□□ 0.38
GPC1-202ENST00000420138 IGFBP2P18065 325 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 GZMHP20718 246 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 EDDM3BP56851 147 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 PRSS54Q6PEW0 395 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 MARVELD3Q96A59 401 aa17.4■□□□□ 0.38
GPC1-202ENST00000420138 DSCAMO60469 2012 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 IGHV1-69-2A0A0G2JMI3 117 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 RLN2P04090 185 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 OR8U9P0C7N5 309 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 PPOXP50336 477 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 HTD2P86397 168 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 C11orf71Q6IPW1 123 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 TCF23Q7RTU1 214 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 OR8U1Q8NH10 309 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 ARPC5LQ9BPX5 153 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 TMEM222Q9H0R3 208 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 MED9Q9NWA0 146 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 ARFGEF3Q5TH69 2177 aa17.39■□□□□ 0.37
GPC1-202ENST00000420138 TNFSF12O43508 249 aa17.38■□□□□ 0.37
GPC1-202ENST00000420138 IFNA21P01568 189 aa17.38■□□□□ 0.37
GPC1-202ENST00000420138 RNF224P0DH78 156 aa17.38■□□□□ 0.37
GPC1-202ENST00000420138 PET100P0DJ07 73 aa17.38■□□□□ 0.37
GPC1-202ENST00000420138 GGNBP1Q5YKI7 109 aa17.38■□□□□ 0.37
GPC1-202ENST00000420138 LYZL2Q7Z4W2 148 aa17.38■□□□□ 0.37
GPC1-202ENST00000420138 CMTM1Q8IZ96 169 aa17.38■□□□□ 0.37
GPC1-202ENST00000420138 C14orf79Q96F83 325 aa17.38■□□□□ 0.37
GPC1-202ENST00000420138 ZNF471Q9BX82 626 aaPredicted RBP17.38■□□□□ 0.37
GPC1-202ENST00000420138 PPP1CCP36873 323 aaKnown RBP17.37■□□□□ 0.37
GPC1-202ENST00000420138 NUP62P37198 522 aaPredicted RBP17.37■□□□□ 0.37
GPC1-202ENST00000420138 AANATQ16613 207 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 AKR1E2Q96JD6 320 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 TMEM56Q96MV1 263 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 OR6C3Q9NZP0 311 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 GSKIPQ9P0R6 139 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 TMEM56-RWDD3S4R434 201 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 TMPRSS2O15393 492 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 SPINT2O43291 252 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 SOD3P08294 240 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 WNT2P09544 360 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 RAB32Q13637 225 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 C17orf58Q2M2W7 97 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 IAH1Q2TAA2 248 aaPredicted RBP17.37■□□□□ 0.37
GPC1-202ENST00000420138 LGI3Q8N145 548 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 PHYHIPLQ96FC7 376 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 SLC25A32Q9H2D1 315 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 OR2S2Q9NQN1 319 aa17.37■□□□□ 0.37
GPC1-202ENST00000420138 IGHV3-43A0A0B4J1X8 118 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 F2RL2O00254 374 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 DANCRP0C864 163 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 IGHV3-43DP0DP04 118 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 F2RP25116 425 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 UCP1P25874 307 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 TOR2AQ5JU69 321 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 THOC7Q6I9Y2 204 aaKnown RBP17.36■□□□□ 0.37
GPC1-202ENST00000420138 PDZD9Q8IXQ8 264 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 C5orf30Q96GV9 206 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 CBLN4Q9NTU7 201 aa17.36■□□□□ 0.37
GPC1-202ENST00000420138 FBXO9Q9UK97 447 aaPredicted RBP17.36■□□□□ 0.37
GPC1-202ENST00000420138 FLNCQ14315 2725 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 F5H0A9 414 aaPredicted RBP17.35■□□□□ 0.37
GPC1-202ENST00000420138 H0Y980 276 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 CDS2O95674 445 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 COL8A2P25067 703 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 LOXL3P58215 753 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 LYPD2Q6UXB3 125 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 MEX3BQ6ZN04 569 aaKnown RBP17.35■□□□□ 0.37
GPC1-202ENST00000420138 DRAM1Q8N682 238 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 RRNAD1Q96FB5 475 aaKnown RBP17.35■□□□□ 0.37
GPC1-202ENST00000420138 CXorf58Q96LI9 332 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 CALYQ9NYX4 217 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 OR5AC2Q9NZP5 309 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 RAI1Q7Z5J4 1906 aaPredicted RBP17.35■□□□□ 0.37
GPC1-202ENST00000420138 FAM208BQ5VWN6 2430 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 NKX6-3A6NJ46 265 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 LYNX1G3V0Z9 82 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 I3L521 148 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 KCNAB3O43448 404 aa17.35■□□□□ 0.37
GPC1-202ENST00000420138 LYNX1P0DP58 116 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms