RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 FGF16O43320 207 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 LANCL1O43813 399 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 TMEM11P17152 192 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 CD1BP29016 333 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 CD83Q01151 205 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 C2orf68Q2NKX9 166 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 GALMQ96C23 342 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 CITED2Q99967 270 aaPredicted RBP16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 ZNF251Q9BRH9 671 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 ABHD14AQ9BUJ0 271 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 RAB22AQ9UL26 194 aa16.34■□□□□ 0.21
PKNOX1-202ENST00000418336 M0QZK8 103 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 FBXO24O75426 580 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 SLC2A2P11168 524 aaPredicted RBP16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 HNF4GQ14541 408 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 MOB1BQ7L9L4 216 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 MOB3BQ86TA1 216 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 LYG1Q8N1E2 194 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 Q8N9W7 124 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 OR56B1Q8NGI3 324 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 AGMATQ9BSE5 352 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 RIMS4Q9H426 269 aaPredicted RBP16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 RNF167Q9H6Y7 350 aa16.33■□□□□ 0.2
PKNOX1-202ENST00000418336 SMIM30A4D0T7 59 aa16.32■□□□□ 0.2
PKNOX1-202ENST00000418336 MFNGO00587 321 aa16.32■□□□□ 0.2
PKNOX1-202ENST00000418336 RAB6AP20340 208 aa16.32■□□□□ 0.2
PKNOX1-202ENST00000418336 MYL9P24844 172 aa16.32■□□□□ 0.2
PKNOX1-202ENST00000418336 IL3RAP26951 378 aa16.32■□□□□ 0.2
PKNOX1-202ENST00000418336 ZNF833PQ6ZTB9 187 aa16.32■□□□□ 0.2
PKNOX1-202ENST00000418336 PTX4Q96A99 478 aa16.32■□□□□ 0.2
PKNOX1-202ENST00000418336 C12orf4Q9NQ89 552 aa16.32■□□□□ 0.2
PKNOX1-202ENST00000418336 LINC01548A6NM66 108 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 CSF1P09603 554 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 SCTP09683 121 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 OR3A3P47888 321 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 HLA-DRB3P79483 266 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 LSAMPQ13449 338 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 HES1Q14469 280 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 TGIF2LXQ8IUE1 241 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 OR1A1Q9P1Q5 309 aa16.31■□□□□ 0.2
PKNOX1-202ENST00000418336 SAA2-SAA4A0A096LPE2 208 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 NOTOA8MTQ0 251 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 TXNL1O43396 289 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 PROP1O75360 226 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 IGHG2P01859 326 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 SAA2P0DJI9 122 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 GADD45AP24522 165 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 NDUFA11Q86Y39 141 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 FAM71E2Q8N5Q1 922 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 OR5AU1Q8NGC0 362 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 OR10R2Q8NGX6 335 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 OR2T10Q8NGZ9 312 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 FAM110DQ8TAY7 271 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 RITA1Q96K30 269 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 NABP2Q9BQ15 211 aa16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 MRPL20Q9BYC9 149 aaKnown RBP16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 CHMP1AQ9HD42 196 aaPredicted RBP16.3■□□□□ 0.2
PKNOX1-202ENST00000418336 ITGB1BP1O14713 200 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 ST8SIA5O15466 376 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 KCNAB3O43448 404 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 MOSP00540 346 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 CLEC2LP0C7M8 214 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 F2RL1P55085 397 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 TPRA1Q86W33 373 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 IL1F10Q8WWZ1 152 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 CMSS1Q9BQ75 279 aaKnown RBP16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 TOLLIPQ9H0E2 274 aa16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 ELF5Q9UKW6 265 aaPredicted RBP16.29■□□□□ 0.2
PKNOX1-202ENST00000418336 TRIM64CA6NLI5 447 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 WIPF1O43516 503 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 SDC2P34741 201 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 NEDD8Q15843 81 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 RAB3CQ96E17 227 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 NOL4LQ96MY1 436 aaPredicted RBP16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 CENPOQ9BU64 300 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 ABCG5Q9H222 651 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 ABRACLQ9P1F3 81 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 SSR3Q9UNL2 185 aa16.28■□□□□ 0.2
PKNOX1-202ENST00000418336 RGS11O94810 467 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 OPN1MWP04001 364 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 FCGR3AP08637 254 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 OPN1MW2P0DN77 364 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 OPN1MW3P0DN78 364 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 HIST1H1DP16402 221 aaKnown RBP16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 GNB3P16520 340 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 CD36P16671 472 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 FAM71F2Q6NXP2 309 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 SFXN4Q6P4A7 337 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 SETD6Q8TBK2 473 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 S1PR3Q99500 378 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 CHCHD6Q9BRQ6 235 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 LIN7CQ9NUP9 197 aaKnown RBP16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 SLC23A1Q9UHI7 598 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 MGAT4AQ9UM21 535 aa16.27■□□□□ 0.2
PKNOX1-202ENST00000418336 TRDCB7Z8K6 153 aa16.26■□□□□ 0.19
PKNOX1-202ENST00000418336 PLXNB1O43157 2135 aa16.26■□□□□ 0.19
PKNOX1-202ENST00000418336 RANBP1P43487 201 aa16.26■□□□□ 0.19
PKNOX1-202ENST00000418336 GPR12P47775 334 aa16.26■□□□□ 0.19
PKNOX1-202ENST00000418336 NSUN5P1Q3KNT7 163 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms