RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 OR1L1Q8NH94 360 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 TMEM54Q969K7 222 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 TM2D1Q9BX74 207 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 MAP1LC3BQ9GZQ8 125 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 OR2D2Q9H210 308 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 OR5H1A6NKK0 313 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 MT-CO3P00414 261 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 SERPINA7P05543 415 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 SOD3P08294 240 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 CCL11P51671 97 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 HLA-DRB3P79483 266 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 PRSS8Q16651 343 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 OR51G1Q8NGK1 321 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 IMMP1LQ96LU5 166 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 TUBA4BQ9H853 241 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 SMG1Q96Q15 3661 aaKnown RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 RAMP3O60896 148 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 ACTL6BO94805 426 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 GAPDHP04406 335 aaKnown RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 UBE2NP61088 152 aaKnown RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 DNASE2BQ8WZ79 361 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 TWSG1Q9GZX9 223 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 CDH20Q9HBT6 801 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 TUBD1Q9UJT1 453 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 COL12A1Q99715 3063 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 NOTCH3Q9UM47 2321 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 ZNF705FA8MVS1 300 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 RPL36A-HNRNPH2H7BZ11 118 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 WISP2O76076 250 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 IFNA10P01566 189 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 ZNF705DP0CH99 300 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 ZNF705BP0CI00 300 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 THBS3P49746 956 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 NUP210LQ5VU65 1888 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 YLPM1P49750 1951 aaKnown RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 IGLV3-12A0A075B6K2 115 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 PPIHO43447 177 aaKnown RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 SYNGR2O43760 224 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 SCGB1D1O95968 90 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 SRP19P09132 144 aaKnown RBP11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 CCL1P22362 96 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 F2RP25116 425 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 RAB4BP61018 213 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 C18orf12Q96KH6 178 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
TNFRSF8-203ENST00000417814 ZNF737O75373 536 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 IGHV3-48P01763 117 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H1BP16401 226 aaKnown RBP11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 CRYGSP22914 178 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 SRD5A2P31213 254 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST3H3Q16695 136 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 ZNF385CQ66K41 422 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 RTL6Q6ICC9 239 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 SSX7Q7RTT5 188 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 SSMEM1Q8WWF3 244 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 PCGF1Q9BSM1 259 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 FGF23Q9GZV9 251 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 Q9N2K0 584 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 GCM1Q9NP62 436 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 FOXD3Q9UJU5 478 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 STRAPQ9Y3F4 350 aaKnown RBP11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 TRAV38-1A0A0B4J264 116 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 LY6G6EA0A0G2JKS1 128 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 ZNF716A6NP11 495 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 K7ESF4 209 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 K7N7A8 449 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 PAGE4O60829 102 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 CST2P09228 141 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 HOXA5P20719 270 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 PAX6P26367 422 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 ICAM4Q14773 271 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 FAM201AQ5SY85 155 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 GGNQ86UU5 652 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 MDP1Q86V88 176 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 GNG12Q9UBI6 72 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 BOKQ9UMX3 212 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 FUT9Q9Y231 359 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 U3KQA8 63 aa11.24□□□□□ -0.61
TNFRSF8-203ENST00000417814 IGHV3OR15-7A0A075B7D8 119 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 DTYMKP23919 212 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 PKIAP61925 76 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 C10orf128Q5T292 105 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 C6orf15Q6UXA7 325 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 PPP1R32Q7Z5V6 425 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BHQ93079 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 OR5B12Q96R08 314 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BNQ99877 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 HIST1H2BMQ99879 126 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 GINS3Q9BRX5 216 aa11.23□□□□□ -0.61
TNFRSF8-203ENST00000417814 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms