RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 NRGNQ92686 78 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 SEH1LQ96EE3 360 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 NEDD4LQ96PU5 975 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 SOSTQ9BQB4 213 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 NICN1Q9BSH3 213 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 ZNF701Q9NV72 531 aaPredicted RBP4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 RABL2AQ9UBK7 228 aaPredicted RBP4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 EXTL2Q9UBQ6 330 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 GLS2Q9UI32 602 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 RABL2BQ9UNT1 228 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 PLEKHA6Q9Y2H5 1048 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 WIPI2Q9Y4P8 454 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 PPIAL4AQ9Y536 164 aa4.82□□□□□ -1.64
NIFKP3-201ENST00000417799 DYSFO75923 2080 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 UTP20O75691 2785 aaKnown RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 CHD3Q12873 2000 aaKnown RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 IGKV1D-17A0A075B6S4 117 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 TRAV18A0A075B6X5 111 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 IGHV3OR15-7A0A075B7D8 119 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 TRAV24A0A0B4J272 114 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 FABP12A6NFH5 140 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 RFPL4AA6NLU0 287 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 OR2AT4A6NND4 320 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 FOXI3A8MTJ6 420 aaPredicted RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 CLDN25C9JDP6 229 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 RFPL4AL1F8VTS6 287 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 TRIM77I1YAP6 450 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 PPIHO43447 177 aaKnown RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 KCNAB3O43448 404 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 PDCD6O75340 191 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 OR7C1O76099 320 aaPredicted RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 FSTL3O95633 263 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 OR2H2O95918 312 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 HAND1O96004 215 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 GLAP06280 429 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 PSG2P11465 335 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 FUT3P21217 361 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 PTBP1P26599 531 aaKnown RBP eCLIP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 PRDX2P32119 198 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 MDH2P40926 338 aaKnown RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 MNDAP41218 407 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 ATP5J2P56134 94 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 BTG1P62324 171 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 SCN1BQ07699 218 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 GAGE5Q13069 117 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 GAGE6Q13070 117 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 MADCAM1Q13477 382 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 ZMYND11Q15326 602 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 KCNJ8Q15842 424 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 CARTPTQ16568 116 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 MPV17LQ2QL34 196 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 CDNFQ49AH0 187 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 TMEM69Q5SWH9 247 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 FAM131AQ6UXB0 335 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 BAIAP2L2Q6UXY1 529 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 CHST4Q8NCG5 386 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 C19orf18Q8NEA5 215 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 DEFB108BQ8NET1 73 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 OR5T2Q8NGG2 359 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 ANGPTL6Q8NI99 470 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 S100ZQ8WXG8 99 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 RAB1CQ92928 201 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 RAB3CQ96E17 227 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 SDSLQ96GA7 329 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 TIMD4Q96H15 378 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 ARHGAP5-AS1Q96IT6 56 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 TSC22D3Q99576 134 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 PECRQ9BY49 303 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 SPACA1Q9HBV2 294 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 TMEM165Q9HC07 324 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 MYOZ1Q9NP98 299 aaPredicted RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 PLEKHJ1Q9NW61 149 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 ZNF581Q9P0T4 197 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 ZNF222Q9UK12 451 aa4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 MRPS7Q9Y2R9 242 aaKnown RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 HRNRQ86YZ3 2850 aaPredicted RBP4.81□□□□□ -1.64
NIFKP3-201ENST00000417799 TMEM235A6NFC5 223 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 SERPINE3A8MV23 424 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 MCRIP1C9JLW8 97 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 SIRPB1O00241 398 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 SLC33A1O00400 549 aaPredicted RBP4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 NDUFA2O43678 99 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 IGHV2-70P01814 119 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 HLA-DQB1P01920 261 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 GYPAP02724 150 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 TFF1P04155 84 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 MELTFP08582 738 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 ZNF44P15621 663 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 HIST1H1DP16402 221 aaKnown RBP4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 GNB3P16520 340 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 GIFP27352 417 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 GPR6P46095 362 aaPredicted RBP4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 GABRA2P47869 451 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 CEBPDP49716 269 aaPredicted RBP4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 TAS2R20P59543 309 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 PITPNAQ00169 270 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 ZNF45Q02386 682 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 IL18Q14116 193 aa4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 RBM39Q14498 530 aaKnown RBP4.8□□□□□ -1.64
NIFKP3-201ENST00000417799 ZNF846Q147U1 533 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms