RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 MOKQ9UQ07 419 aa4.72□□□□□ -1.65
EPHA4-204ENST00000415749 RNF24Q9Y225 148 aa4.72□□□□□ -1.65
EPHA4-204ENST00000415749 RPL36Q9Y3U8 105 aaKnown RBP4.72□□□□□ -1.65
EPHA4-204ENST00000415749 KCNE3Q9Y6H6 103 aa4.72□□□□□ -1.65
EPHA4-204ENST00000415749 V9GYH0 126 aa4.72□□□□□ -1.65
EPHA4-204ENST00000415749 KMT2CQ8NEZ4 4911 aaKnown RBP4.72□□□□□ -1.65
EPHA4-204ENST00000415749 IGHV3OR16-12A0A075B7B8 117 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 A0A087WUU8 490 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 IGHV3-15A0A0B4J1V0 119 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 PRSS37A4D1T9 235 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 MPTX1A8MV57 137 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 LOC110117498-PIK3R3F6TDL0 507 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 UTS2O95399 124 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 THY1P04216 161 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 HMGN2P05204 90 aaKnown RBP4.71□□□□□ -1.66
EPHA4-204ENST00000415749 HCKP08631 526 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 IFI6P09912 130 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 OR4A8P0C604 315 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 PATE4P0C8F1 98 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 LIMS3P0CW19 117 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 LIMS4P0CW20 117 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 RPS4Y1P22090 263 aaKnown RBP4.71□□□□□ -1.66
EPHA4-204ENST00000415749 PRTN3P24158 256 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 CALCRP30988 508 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 OMPP47874 163 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 PPOXP50336 477 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 HNRNPA3P51991 378 aaKnown RBP4.71□□□□□ -1.66
EPHA4-204ENST00000415749 ARHGDIBP52566 201 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 MRPS11P82912 194 aaKnown RBP4.71□□□□□ -1.66
EPHA4-204ENST00000415749 TSPAN31Q12999 210 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 TPBGQ13641 420 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 GINS1Q14691 196 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 ZNF79Q15937 498 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 GABRA6Q16445 453 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 PLPPR5Q32ZL2 321 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 TIMM50Q3ZCQ8 353 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 SLC22A6Q4U2R8 563 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 CD200R1LQ6Q8B3 271 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 GDPD3Q7L5L3 318 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 JAGN1Q8N5M9 183 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 INO80EQ8NBZ0 244 aaPredicted RBP4.71□□□□□ -1.66
EPHA4-204ENST00000415749 ATP6V1C2Q8NEY4 427 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 BEST4Q8NFU0 473 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 OR4K5Q8NGD3 323 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 OR51F2Q8NH61 342 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 OR56B4Q8NH76 319 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 CLDND2Q8NHS1 167 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 CAPSLQ8WWF8 208 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 C22orf15Q8WYQ4 148 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 SEC22AQ96IW7 307 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 MS4A4EQ96PG1 132 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 OR7D2Q96RA2 312 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 SOSTQ9BQB4 213 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 CCDC32Q9BV29 185 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 FAIM2Q9BWQ8 316 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 MND1Q9BWT6 205 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 TMEM59Q9BXS4 323 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 MFFQ9GZY8 342 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 MIXL1Q9H2W2 232 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 RANBP3Q9H6Z4 567 aaPredicted RBP4.71□□□□□ -1.66
EPHA4-204ENST00000415749 BEX1Q9HBH7 125 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 SDF2L1Q9HCN8 221 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 CA10Q9NS85 328 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 TREM2Q9NZC2 230 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 DNAJC27Q9NZQ0 273 aa4.71□□□□□ -1.66
EPHA4-204ENST00000415749 MRPS28Q9Y2Q9 187 aaKnown RBP4.71□□□□□ -1.66
EPHA4-204ENST00000415749 A0A1W2PRD5 423 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 MEIOCA2RUB1 952 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 RAB19A4D1S5 217 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 GJE1A6NN92 205 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 J3QRE1 110 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 SOX14O95416 240 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 RAB36O95755 333 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 NR2C1P13056 603 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 CCL2P13500 99 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 HTR1FP30939 366 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 NTSP30990 170 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 EIF1P41567 113 aaKnown RBP4.7□□□□□ -1.66
EPHA4-204ENST00000415749 GPR6P46095 362 aaPredicted RBP4.7□□□□□ -1.66
EPHA4-204ENST00000415749 NCBP2P52298 156 aaKnown RBP eCLIP4.7□□□□□ -1.66
EPHA4-204ENST00000415749 PRPS1P60891 318 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 ERVK-25P63136 954 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 GNA13Q14344 377 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 TRAM2Q15035 370 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 ULK3Q6PHR2 472 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 RASSF6Q6ZTQ3 369 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 CLDN22Q8N7P3 220 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 SIGLECL1Q8N7X8 197 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 OR9A2Q8NGT5 310 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 OR4Q3Q8NH05 313 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 LYPD6BQ8NI32 183 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 GNPDA2Q8TDQ7 276 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 TMEM190Q8WZ59 177 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 GTF3AQ92664 365 aaKnown RBP4.7□□□□□ -1.66
EPHA4-204ENST00000415749 TAF15Q92804 592 aaKnown RBP eCLIP4.7□□□□□ -1.66
EPHA4-204ENST00000415749 PRSS27Q9BQR3 290 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 CHIAQ9BZP6 476 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 SRRQ9GZT4 340 aa4.7□□□□□ -1.66
EPHA4-204ENST00000415749 C6orf62Q9GZU0 229 aaPredicted RBP4.7□□□□□ -1.66
EPHA4-204ENST00000415749 ZC4H2Q9NQZ6 224 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms