RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 KCNK2O95069 426 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR5F1O95221 314 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 GPR75O95800 540 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 TSPAN19P0C672 248 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF14P17017 642 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF24P17028 368 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 DTYMKP23919 212 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CD40LGP29965 261 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 HOXA6P31267 233 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CEACAM3P40198 252 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 IDH2P48735 452 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 TGM4P49221 684 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CSNK1EP49674 416 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 ETV1P50549 477 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 XKP51811 444 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CTBP2P56545 445 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 RGS8P57771 180 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 VBP1P61758 197 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 TGM3Q08188 693 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CDC20Q12834 499 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 TSPAN31Q12999 210 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 EBPQ15125 230 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF726P1Q15940 193 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 NNATQ16517 81 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 PGGHGQ32M88 737 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 SMUG1Q53HV7 270 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 GUSBP11Q6P575 273 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 SLC25A34Q6PIV7 304 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CD200R1LQ6Q8B3 271 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 RASSF6Q6ZTQ3 369 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 MBOAT2Q6ZWT7 520 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 SSX6Q7RTT6 188 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 FAM122BQ7Z309 247 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 SNX29P2Q8IUI4 249 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 LGI3Q8N145 548 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 OSR2Q8N2R0 312 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 COX18Q8N8Q8 333 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CDRT4Q8N9R6 151 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 GATSQ8NAP1 163 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR6Q1Q8NGQ2 317 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR8U1Q8NH10 309 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 PIFOQ8TCI5 191 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 RPS4Y2Q8TD47 263 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 LMX1AQ8TE12 382 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 RAB2BQ8WUD1 216 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 LZICQ8WZA0 190 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 SLC38A4Q969I6 547 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 APOL4Q9BPW4 351 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 COPS4Q9BT78 406 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 NUDT9Q9BW91 350 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 TSSK6Q9BXA6 273 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR51E2Q9H255 320 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR52D1Q9H346 318 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 FBXO8Q9NRD0 319 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 PRTFDC1Q9NRG1 225 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 NDUFB11Q9NX14 153 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 MS4A12Q9NXJ0 267 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 IL20Q9NYY1 176 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CCDC59Q9P031 241 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 DHCR7Q9UBM7 475 aaKnown RBP2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 CLEC2DQ9UHP7 191 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 PSME2Q9UL46 239 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 SIGLEC7Q9Y286 467 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 V9GYH0 126 aa2.01□□□□□ -2.09
HMGB1P11-201ENST00000413899 NCOA6Q14686 2063 aaPredicted RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 USP34Q70CQ2 3546 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRAV27A0A087WT01 109 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRAPPC13A5PLN9 417 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CCDC160A6NGH7 325 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 FAM183AA6NL82 134 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 LYRM9A8MSI8 78 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 LRRN3E7EW58 273 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 RPL36A-HNRNPH2H7BZ11 118 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 SLC22A1O15245 554 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CHP2O43745 196 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CTNSO60931 367 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 SERPINB7O75635 380 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 SC5DO75845 299 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 SULT1C4O75897 302 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 IFNA14P01570 189 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 HLA-DQA1P01909 254 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CD74P04233 296 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 DBIP07108 87 aaKnown RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CD3GP09693 182 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CTSEP14091 401 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CD36P16671 472 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 RAB3AP20336 220 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 PSMB9P28065 219 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 GABRA3P34903 492 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 MPIP34949 423 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 UGT2B10P36537 528 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 ETV6P41212 452 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CXCL12P48061 93 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 RGS6P49758 472 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 C21orf59P57076 290 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TAS2R41P59536 307 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 UBE2NP61088 152 aaKnown RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 RPS25P62851 125 aaKnown RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 PRR3P79522 188 aaKnown RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 PRKCDQ05655 676 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms