RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 WIPI2Q9Y4P8 454 aa7.84□□□□□ -1.15
SOX9-AS1-201ENST00000412640 PLXNB1O43157 2135 aa7.84□□□□□ -1.16
SOX9-AS1-201ENST00000412640 IGHV3OR16-10A0A075B7F0 116 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 A6NLC8 198 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 VSTM5A8MXK1 200 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 NPIPB11E5RHQ5 1161 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 FABP7O15540 132 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 HOXA3O43365 443 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 DUS4LO95620 317 aaKnown RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 IGHV1-46P01743 117 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 OPN1MWP04001 364 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 CTSDP07339 412 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 GSTT2P0CG29 244 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 OPN1MW2P0DN77 364 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 OPN1MW3P0DN78 364 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 ZNF44P15621 663 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 GLRA1P23415 457 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 TNFSF4P23510 183 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 NPY4RP50391 375 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 RAP2BP61225 183 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 PPP1R1AQ13522 171 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 PAN3Q58A45 887 aaKnown RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 SLC35E4Q6ICL7 350 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 C12orf45Q8N5I9 185 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 ADAD2Q8NCV1 583 aaKnown RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 OR4A4PQ8NGN8 299 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 ZFAND1Q8TCF1 268 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 TMEM230Q96A57 120 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 MOB3AQ96BX8 217 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 RAB39BQ96DA2 213 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 HYLS1Q96M11 299 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 DMRTB1Q96MA1 342 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 OR2V2Q96R30 315 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 ZNF2Q9BSG1 426 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 CABLES2Q9BTV7 478 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 RANBP3Q9H6Z4 567 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 CHMP1AQ9HD42 196 aaPredicted RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 MBNL3Q9NUK0 354 aaKnown RBP7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 PIPOXQ9P0Z9 390 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 MGAT4CQ9UBM8 478 aa7.83□□□□□ -1.16
SOX9-AS1-201ENST00000412640 DNAH3Q8TD57 4116 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 DBX1A6NMT0 343 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 RP2O75695 350 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 TUSC2O75896 110 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 RGS11O94810 467 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 NDUFA7O95182 113 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 SFT2D2O95562 160 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 IGHV2-5P01817 119 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 RPS2P15880 293 aaKnown RBP7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 GLP1RP43220 463 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 HLA-DRB3P79483 266 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 KCNJ8Q15842 424 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 FAM209AQ5JX71 171 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 NLRC3Q7RTR2 1065 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 GCSAMQ8N6F7 178 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 DEFB108BQ8NET1 73 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 PLPPR1Q8TBJ4 325 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 NEK7Q8TDX7 302 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 LRRC29Q8WV35 223 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 ITLN1Q8WWA0 313 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 ZNF486Q96H40 463 aaPredicted RBP7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 FXYD6Q9H0Q3 95 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 UFSP2Q9NUQ7 469 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 ZNF222Q9UK12 451 aa7.82□□□□□ -1.16
SOX9-AS1-201ENST00000412640 NOTCH3Q9UM47 2321 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 TRBV6-7A0A0A0MS04 114 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 IGKV1-6A0A0C4DH72 117 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 TMEM30CPA0ZSE6 113 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 C17orf100A8MU93 164 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 G3V3Q6 166 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 SIRPB1O00241 398 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 HSPB6O14558 160 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 SPRY3O43610 288 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 PSPNO60542 156 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 SNAPC5O75971 98 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 HLA-AP01891 365 aaKnown RBP7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 TK1P04183 234 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 FCGR2CP31995 323 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 PRDX2P32119 198 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 H2BFSP57053 126 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 PROK1P58294 105 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 SUPT4H1P63272 117 aaKnown RBP7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 TNFAIP6P98066 277 aaPredicted RBP7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 HERPUD1Q15011 391 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 HMGN3Q15651 99 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 IGSF11Q5DX21 431 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 LY6G6FQ5SQ64 297 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 MOGAT3Q86VF5 341 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 SLC38A6Q8IZM9 456 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 OR5M8Q8NGP6 311 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 LINC01006Q8NI28 216 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 PHB2Q99623 299 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 RSRP1Q9BUV0 290 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 TOLLIPQ9H0E2 274 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 NCOR1P1Q9H4R4 102 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 GCM1Q9NP62 436 aa7.81□□□□□ -1.16
SOX9-AS1-201ENST00000412640 MMP26Q9NRE1 261 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms