RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 VEGFCP49767 419 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 F2RL1P55085 397 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 MOGAT2Q3SYC2 334 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 SAMD5Q5TGI4 173 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 UBE2UQ5VVX9 321 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 ARHGAP5-AS1Q96IT6 56 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 YPEL2Q96QA6 119 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 ABHD14AQ9BUJ0 271 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 PECRQ9BY49 303 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 RAB9BQ9NP90 201 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 PLEKHJ1Q9NW61 149 aa15.06■□□□□ 0
SF3A1-202ENST00000411423 TRDV1A0A1B0GX56 115 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 LANCL1O43813 399 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 IGHG2P01859 326 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 OR3A3P47888 321 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 LSAMPQ13449 338 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 BEAN1Q3B7T3 259 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 OR2T10Q8NGZ9 312 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 SETD6Q8TBK2 473 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 GALMQ96C23 342 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 RITA1Q96K30 269 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 URM1Q9BTM9 101 aaKnown RBP15.05■□□□□ -0
SF3A1-202ENST00000411423 MRPL20Q9BYC9 149 aaKnown RBP15.05■□□□□ -0
SF3A1-202ENST00000411423 IFI27L2Q9H2X8 130 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 CHMP1AQ9HD42 196 aaPredicted RBP15.05■□□□□ -0
SF3A1-202ENST00000411423 STEAP1Q9UHE8 339 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 KCNK7Q9Y2U2 307 aa15.05■□□□□ -0
SF3A1-202ENST00000411423 TRBV6-6A0A0A6YYG2 114 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 TRAV1-2A0A0B4J238 106 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 TCRBV4S1A1TA0A5B7 111 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 SMIM30A4D0T7 59 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 NCBP2LA6PVI3 153 aaKnown RBP15.04■□□□□ -0
SF3A1-202ENST00000411423 MOSP00540 346 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 LY6G6FQ5SQ64 297 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 STEAP3Q658P3 488 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 C22orf42Q6IC83 251 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 C18orf65Q6ZTR6 163 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 IL1F10Q8WWZ1 152 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 NABP2Q9BQ15 211 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 ZNF251Q9BRH9 671 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 OR1A1Q9P1Q5 309 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 HSF4Q9ULV5 492 aa15.04■□□□□ -0
SF3A1-202ENST00000411423 SAA2-SAA4A0A096LPE2 208 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 PSMB11A5LHX3 300 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 ST8SIA5O15466 376 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 MRPS14O60783 128 aaKnown RBP15.03■□□□□ -0
SF3A1-202ENST00000411423 SCTP09683 121 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 SAA2P0DJI9 122 aaPredicted RBP15.03■□□□□ -0
SF3A1-202ENST00000411423 OXLD1Q5BKU9 147 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 ZNF833PQ6ZTB9 187 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 FAM71E2Q8N5Q1 922 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 S1PR3Q99500 378 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 HSPB9Q9BQS6 159 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 ABCG5Q9H222 651 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 Q9N2K0 584 aa15.03■□□□□ -0
SF3A1-202ENST00000411423 TSSC4Q9Y5U2 329 aaPredicted RBP15.03■□□□□ -0
SF3A1-202ENST00000411423 IGKV1-6A0A0C4DH72 117 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 IFITM5A6NNB3 132 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 TXNL1O43396 289 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 CNTFRP26992 372 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 PSMB9P28065 219 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 GPR12P47775 334 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 HLA-DRB3P79483 266 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 SLC35E3Q7Z769 313 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 OR4F17Q8NGA8 305 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 OR4X2Q8NGF9 303 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 OR4F4Q96R69 305 aa15.02■□□□□ -0
SF3A1-202ENST00000411423 SERPINE3A8MV23 424 aa15.01□□□□□ -0.01
SF3A1-202ENST00000411423 PRB2P02812 416 aaPredicted RBP15.01□□□□□ -0.01
SF3A1-202ENST00000411423 SLC2A2P11168 524 aaPredicted RBP15.01□□□□□ -0.01
SF3A1-202ENST00000411423 RAB3BP20337 219 aa15.01□□□□□ -0.01
SF3A1-202ENST00000411423 RPL39P5Q59GN2 51 aa15.01□□□□□ -0.01
SF3A1-202ENST00000411423 KPRPQ5T749 579 aaPredicted RBP15.01□□□□□ -0.01
SF3A1-202ENST00000411423 STPG2Q8N412 459 aa15.01□□□□□ -0.01
SF3A1-202ENST00000411423 LIN7CQ9NUP9 197 aaKnown RBP15.01□□□□□ -0.01
SF3A1-202ENST00000411423 TXNL4BQ9NX01 149 aaKnown RBP15.01□□□□□ -0.01
SF3A1-202ENST00000411423 ABRACLQ9P1F3 81 aa15.01□□□□□ -0.01
SF3A1-202ENST00000411423 RAB22AQ9UL26 194 aa15.01□□□□□ -0.01
SF3A1-202ENST00000411423 LRRC42Q9Y546 428 aa15.01□□□□□ -0.01
SF3A1-202ENST00000411423 PDCD5O14737 125 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 GALP22466 123 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 MYL9P24844 172 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 ETV3LQ6ZN32 361 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 MOB1BQ7L9L4 216 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 OR2AK2Q8NG84 335 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 OR56B1Q8NGI3 324 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 ABHD14BQ96IU4 210 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 CMSS1Q9BQ75 279 aaKnown RBP15□□□□□ -0.01
SF3A1-202ENST00000411423 AGMATQ9BSE5 352 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 YTHDF1Q9BYJ9 559 aaKnown RBP15□□□□□ -0.01
SF3A1-202ENST00000411423 C12orf4Q9NQ89 552 aa15□□□□□ -0.01
SF3A1-202ENST00000411423 RAB27BO00194 218 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 PROP1O75360 226 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 RGS11O94810 467 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 SNRPBP14678 240 aaKnown RBP14.99□□□□□ -0.01
SF3A1-202ENST00000411423 PSMD7P51665 324 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 KHDC1LQ5JSQ8 128 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 ZNF773Q6PK81 442 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 LCNL1Q6ZST4 164 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 CHPT1Q8WUD6 406 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms