RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 EDARADDQ8WWZ3 215 aa12.38□□□□□ -0.43
LSM5-207ENST00000410044 NUP50Q9UKX7 468 aa12.38□□□□□ -0.43
LSM5-207ENST00000410044 GAB2Q9UQC2 676 aa12.38□□□□□ -0.43
LSM5-207ENST00000410044 TRAV40A0A0B4J280 105 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 TOR1AO14656 332 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 PMP2P02689 132 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 CD3DP04234 171 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 RFX2P48378 723 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 KLF9Q13886 244 aaPredicted RBP12.37□□□□□ -0.43
LSM5-207ENST00000410044 TUSC1Q2TAM9 212 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 HLA-DRB5Q30154 266 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 MINOS1Q5TGZ0 78 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 C9orf139Q6ZV77 190 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 OR10V1Q8NGI7 309 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 OR4P4Q8NGL7 312 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 LEAP2Q969E1 77 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 GINS4Q9BRT9 223 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 AGMATQ9BSE5 352 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 C11orf54Q9H0W9 315 aaPredicted RBP12.37□□□□□ -0.43
LSM5-207ENST00000410044 MMP28Q9H239 520 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 RDH8Q9NYR8 311 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 OR2W1Q9Y3N9 320 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 TBL2Q9Y4P3 447 aaKnown RBP12.37□□□□□ -0.43
LSM5-207ENST00000410044 MINOS1-NBL1R4GNA1 71 aa12.37□□□□□ -0.43
LSM5-207ENST00000410044 FAM172BPA6NC97 362 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 BUB1B-PAK6H3BSN5 160 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 NPFFO15130 113 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 ARG1P05089 322 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 ZNF735P0CB33 412 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 AKAIN1P0CW23 69 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 IL7P13232 177 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 COX7A1P24310 79 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 RAB7AP51149 207 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 ZNF137PP52743 207 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 AP3S2P59780 193 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 PRB3Q04118 309 aaPredicted RBP12.36□□□□□ -0.43
LSM5-207ENST00000410044 MEF2DQ14814 521 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 RNASE10Q5GAN6 216 aaKnown RBP12.36□□□□□ -0.43
LSM5-207ENST00000410044 TOMM5Q8N4H5 51 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 AJUBAQ96IF1 538 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 TINAGL1Q9GZM7 467 aaPredicted RBP12.36□□□□□ -0.43
LSM5-207ENST00000410044 EHFQ9NZC4 300 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 ZNF69Q9UC07 566 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 F8P00451 2351 aa12.36□□□□□ -0.43
LSM5-207ENST00000410044 SLC31A2O15432 143 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 RAB3DO95716 219 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 IGHV3-7P01780 117 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 HNF1AP20823 631 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 NFYAP23511 347 aaPredicted RBP12.35□□□□□ -0.43
LSM5-207ENST00000410044 HTR1DP28221 377 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 FCGR2CP31995 323 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 LDLRAD2Q5SZI1 272 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 OR2AK2Q8NG84 335 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 OR6F1Q8NGZ6 308 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 ST6GALNAC6Q969X2 333 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 MALSU1Q96EH3 234 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 TSC22D3Q99576 134 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 ABHD14AQ9BUJ0 271 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 PARP12Q9H0J9 701 aaKnown RBP12.35□□□□□ -0.43
LSM5-207ENST00000410044 DPM3Q9P2X0 92 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 CDC42EP3Q9UKI2 254 aa12.35□□□□□ -0.43
LSM5-207ENST00000410044 M0QYG6 137 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 PPYP01298 95 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 GNG10P50151 68 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 LGALS4P56470 323 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 TRIQKQ629K1 86 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 LHFPL1Q86WI0 220 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 TMEM17Q86X19 198 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 LDLRAD3Q86YD5 345 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 PDZD9Q8IXQ8 264 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 OR4D10Q8NGI6 311 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 OR4C16Q8NGL9 310 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 SLC6A7Q99884 636 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 MEGF9Q9H1U4 602 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 IFI27L2Q9H2X8 130 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 PRDM13Q9H4Q3 707 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 HRASLSQ9HDD0 168 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 PIPOXQ9P0Z9 390 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
LSM5-207ENST00000410044 TLN2Q9Y4G6 2542 aa12.34□□□□□ -0.43
LSM5-207ENST00000410044 ANK3Q12955 4377 aaKnown RBP12.33□□□□□ -0.44
LSM5-207ENST00000410044 IGHV3OR16-10A0A075B7F0 116 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 A0A1W2PPE3 182 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 LEUTXA8MZ59 168 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 OOSP1A8MZH6 123 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 J3QRK9 145 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 RAB29O14966 203 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 UPK1BO75841 260 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 SLC22A5O76082 557 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 IFNA6P05013 189 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 AADACP22760 399 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 SAA4P35542 130 aa12.33□□□□□ -0.44
LSM5-207ENST00000410044 LUMP51884 338 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms