RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 TRBV24-1A0A075B6N3 115 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 TGIF2-C20orf24A0A0A6YYL0 155 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 YIF1AO95070 293 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 IFNA1P01562 189 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 JMJD7P0C870 316 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 NDUFA6P56556 154 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 IZUMO4Q1ZYL8 232 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 DNLZQ5SXM8 178 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 TMEM14EPQ6UXP3 125 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 AGMATQ9BSE5 352 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 ZNF665Q9H7R5 613 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 ZMAT5Q9UDW3 170 aaKnown RBP14.1□□□□□ -0.15
LIMS2-208ENST00000410011 PPP1R3CQ9UQK1 317 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 A0A1W2PR80 420 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 PGA5P0DJD9 388 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 S100A2P29034 98 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 MSMO1Q15800 293 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 FGFRL1Q8N441 504 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 SCCPDHQ8NBX0 429 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 VSIRQ9H7M9 311 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 PRSS50Q9UI38 385 aa14.1□□□□□ -0.15
LIMS2-208ENST00000410011 KLF13Q9Y2Y9 288 aaPredicted RBP14.1□□□□□ -0.15
LIMS2-208ENST00000410011 CYB5BO43169 146 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 MT-CO3P00414 261 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 PDGFBP01127 241 aaPredicted RBP14.09□□□□□ -0.15
LIMS2-208ENST00000410011 PLGLB1Q02325 96 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 ATP6V1FQ16864 119 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 TBC1D28Q2M2D7 210 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 WDR86Q86TI4 376 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 MDP1Q86V88 176 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 C1orf87Q8N0U7 546 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 DRAM1Q8N682 238 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 TAF15Q92804 592 aaKnown RBP eCLIP14.09□□□□□ -0.15
LIMS2-208ENST00000410011 FAM210BQ96KR6 192 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 OR4C12Q96R67 309 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 URGCP-MRPS24S4R325 110 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 ZFP92A6NM28 416 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 SH2D1BO14796 132 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 OPN1MWP04001 364 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 OPN1MW2P0DN77 364 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 OPN1MW3P0DN78 364 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 IAPPP10997 89 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 CD81P60033 236 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 LCN15Q6UWW0 184 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 C1orf210Q8IVY1 113 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 LILRB2Q8N423 598 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 TMEM105Q8N8V8 129 aa14.09□□□□□ -0.15
LIMS2-208ENST00000410011 RBM7Q9Y580 266 aaKnown RBP14.09□□□□□ -0.15
LIMS2-208ENST00000410011 C1QTNF9BB2RNN3 333 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 KLRC4-KLRK1H3BQV0 150 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 SP1P08047 785 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 CEACAM6P40199 344 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 MRPL49Q13405 166 aaKnown RBP14.08□□□□□ -0.16
LIMS2-208ENST00000410011 HSPB7Q9UBY9 170 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 TRGC2P03986 189 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 P0C879 139 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 SLC10A1Q14973 349 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 GABRA6Q16445 453 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 PYY3Q5JQD4 70 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 MDS2Q8NDY4 140 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 ZNF407Q9C0G0 2248 aa14.08□□□□□ -0.16
LIMS2-208ENST00000410011 TMEM210A6NLX4 147 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 SIRPB1O00241 398 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 PHOX2AO14813 284 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 TNFRSF9Q07011 255 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 WDR25Q64LD2 544 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-208ENST00000410011 SSX7Q7RTT5 188 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 ZNF645Q8N7E2 425 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 TCTEX1D1Q8N7M0 179 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 PLA2G3Q9NZ20 509 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 TINAGQ9UJW2 476 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 TRAV20A0A0B4J274 112 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 MAP1LC3B2A6NCE7 125 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 ZNF729A6NN14 1252 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-208ENST00000410011 WDR1O75083 606 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 RAC2P15153 192 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 MEOX1P50221 254 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 SLC38A11Q08AI6 406 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 EIF4EBP1Q13541 118 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-208ENST00000410011 ZNF766Q5HY98 468 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 SPANXN5Q5MJ07 72 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 MRPL37Q9BZE1 423 aaKnown RBP14.07□□□□□ -0.16
LIMS2-208ENST00000410011 MAP1LC3BQ9GZQ8 125 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 HES4Q9HCC6 221 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 FOXJ2Q9P0K8 574 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 KCNS2Q9ULS6 477 aa14.07□□□□□ -0.16
LIMS2-208ENST00000410011 PPP1R2P9O14990 202 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 SMPD2O60906 423 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 MBP02144 154 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 NKX6-1P78426 367 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-208ENST00000410011 TMEM164Q5U3C3 297 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 SPNS3Q6ZMD2 512 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 HIST3H2BBQ8N257 126 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 ABHD5Q8WTS1 349 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 ARHGAP21Q5T5U3 1957 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 IQCF6A8MYZ5 107 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 TMEM250H0YL14 139 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 GATCO43716 136 aaKnown RBP14.06□□□□□ -0.16
LIMS2-208ENST00000410011 ZNF737O75373 536 aa14.06□□□□□ -0.16
LIMS2-208ENST00000410011 PTBP3O95758 552 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms