RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 FLNCQ14315 2725 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 USP9XQ93008 2570 aaPredicted RBP11.62□□□□□ -0.55
GPNMB-203ENST00000409458 C13orf42A0A1B0GVH6 325 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 hADV38S2A0JD32 116 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 C5orf51A6NDU8 294 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 HOXB5P09067 269 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 RPL31P62899 125 aaKnown RBP11.62□□□□□ -0.55
GPNMB-203ENST00000409458 UTF1Q5T230 341 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 GSG1LQ6UXU4 331 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 DRAM1Q8N682 238 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 ZNF645Q8N7E2 425 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 AKR1E2Q96JD6 320 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 SPOCK3Q9BQ16 436 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 PLSCR3Q9NRY6 295 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 GNG12Q9UBI6 72 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 RNF150Q9ULK6 438 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 LINC00312Q9Y6C7 94 aa11.62□□□□□ -0.55
GPNMB-203ENST00000409458 UBR5O95071 2799 aaPredicted RBP11.61□□□□□ -0.55
GPNMB-203ENST00000409458 KMT2BQ9UMN6 2715 aaPredicted RBP11.61□□□□□ -0.55
GPNMB-203ENST00000409458 COL12A1Q99715 3063 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 TRAV14DV4A0A0A6YYC5 116 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 ZNF729A6NN14 1252 aaPredicted RBP11.61□□□□□ -0.55
GPNMB-203ENST00000409458 ST8SIA5O15466 376 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 RGS11O94810 467 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 MORN2Q502X0 79 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 LAMTOR1Q6IAA8 161 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 C9orf62Q8N4C0 152 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 LRTM2Q8N967 370 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 H1FXQ92522 213 aaKnown RBP11.61□□□□□ -0.55
GPNMB-203ENST00000409458 C18orf12Q96KH6 178 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 METTL8Q9H825 291 aaKnown RBP11.61□□□□□ -0.55
GPNMB-203ENST00000409458 PSG11Q9UQ72 335 aa11.61□□□□□ -0.55
GPNMB-203ENST00000409458 UBE2J1Q9Y385 318 aaPredicted RBP11.61□□□□□ -0.55
GPNMB-203ENST00000409458 H0Y980 276 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 YPEL1O60688 119 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 NDUFS7O75251 213 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 MMP23AO75900 390 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 S100GP29377 79 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 TLE4Q04727 773 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 MEF2CQ06413 473 aaPredicted RBP11.6□□□□□ -0.55
GPNMB-203ENST00000409458 PRAMEF5Q5TYX0 476 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 LGI3Q8N145 548 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 OR51H1Q8NH63 302 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 OR10C1Q96KK4 312 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 YPEL2Q96QA6 119 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 TMEM222Q9H0R3 208 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 PLEKHF2Q9H8W4 249 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 LINC00574Q9H8X3 128 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 CHODLQ9H9P2 273 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 RAB9BQ9NP90 201 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 GFOD1Q9NXC2 390 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 IDI2-AS1Q9NZ38 188 aa11.6□□□□□ -0.55
GPNMB-203ENST00000409458 PPIHO43447 177 aaKnown RBP11.59□□□□□ -0.55
GPNMB-203ENST00000409458 IGHV3-7P01780 117 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 CCL3L1P16619 93 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 F2RP25116 425 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 UCP1P25874 307 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 EIF4EBP1Q13541 118 aaPredicted RBP11.59□□□□□ -0.55
GPNMB-203ENST00000409458 GGNBP1Q5YKI7 109 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 TMEM200BQ69YZ2 307 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 LYZL2Q7Z4W2 148 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 LEAP2Q969E1 77 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 ABHD14BQ96IU4 210 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 AGMATQ9BSE5 352 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 TAS2R3Q9NYW6 316 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 SLC31A2O15432 143 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 CLDN1O95832 211 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 WNT2P09544 360 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 ZNF134P52741 427 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 ERVFRD-1P60508 538 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 SRPXP78539 464 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 LRRC37A5PQ49AS3 106 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 ZNF841Q6ZN19 808 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 SLC35G3Q8N808 338 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 PPP1R1CQ8WVI7 109 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 EDARADDQ8WWZ3 215 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 TIMD4Q96H15 378 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 ZNF714Q96N38 554 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 NMES1Q9C002 83 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 IFI27L2Q9H2X8 130 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 LPAR3Q9UBY5 353 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 TMEM56-RWDD3S4R434 201 aa11.59□□□□□ -0.55
GPNMB-203ENST00000409458 A1L4Q6 167 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 OVOL3O00110 214 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 F12P00748 615 aaPredicted RBP11.58□□□□□ -0.56
GPNMB-203ENST00000409458 NFYBP25208 207 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 MSMO1Q15800 293 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 Q3ZCU0 254 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 TMEM155Q4W5P6 130 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 BTNL3Q6UXE8 466 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 FAM219AQ8IW50 185 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 SELENOHQ8IZQ5 122 aaKnown RBP11.58□□□□□ -0.56
GPNMB-203ENST00000409458 ZBTB34Q8NCN2 500 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 IGFBPL1Q8WX77 278 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 RAB1CQ92928 201 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 C2orf50Q96LR7 162 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 GAL3ST2Q9H3Q3 398 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms