RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 TRAM1Q15629 374 aa16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 TBCEQ15813 527 aaPredicted RBP16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 ZNF260Q3ZCT1 412 aa16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 CASC10Q5T4H9 136 aa16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 C6orf183Q5T699 404 aa16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 MOB3BQ86TA1 216 aa16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 OR8H3Q8N146 312 aa16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 OR10V1Q8NGI7 309 aa16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 MRPL30Q8TCC3 161 aaKnown RBP16.55■□□□□ 0.24
RHBDD3-202ENST00000406335 A0A0A6YYD4 124 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 TMEM14DPA8MWL7 114 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 CA11O75493 328 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 ZNF816Q0VGE8 651 aaPredicted RBP16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 KIR2DS1Q14954 304 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 SSX1Q16384 188 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 C6orf201Q7Z4U5 140 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 ZNF439Q8NDP4 499 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 OR6M1Q8NGM8 313 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 KCNG3Q8TAE7 436 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 NEDD4LQ96PU5 975 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 FAAP24Q9BTP7 215 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 TM2D1Q9BX74 207 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 TAF9BQ9HBM6 251 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 ACOT13Q9NPJ3 140 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 MBNL3Q9NUK0 354 aaKnown RBP16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 GNG12Q9UBI6 72 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 BLOC1S6Q9UL45 172 aa16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 ZNF256Q9Y2P7 627 aaPredicted RBP16.54■□□□□ 0.24
RHBDD3-202ENST00000406335 IGHV3-72A0A0B4J1Y9 119 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 IGHV1-3A0A0C4DH29 117 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 LINC01548A6NM66 108 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 CCRL2O00421 344 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 SLC17A2O00624 439 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 BPNT1O95861 308 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 PSMA1P25786 263 aaKnown RBP16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 CALRP27797 417 aaKnown RBP16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 ZNF134P52741 427 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 ZNF367Q7RTV3 350 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 C8orf31Q8N9H6 132 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 ST6GALNAC6Q969X2 333 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 PLGRKTQ9HBL7 147 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 SMAD5-AS1Q9Y6J3 95 aa16.53■□□□□ 0.24
RHBDD3-202ENST00000406335 RRP9O43818 475 aaKnown RBP16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 ARL6IP5O75915 188 aa16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 GAPDHP04406 335 aaKnown RBP16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 GNMTQ14749 295 aa16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 CT45A1Q5HYN5 189 aa16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 TRAT1Q6PIZ9 186 aa16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 SLC25A48Q6ZT89 311 aaKnown RBP16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 CT45A3Q8NHU0 189 aa16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 RBMXL1Q96E39 390 aaKnown RBP16.52■□□□□ 0.24
RHBDD3-202ENST00000406335 LYL1P12980 280 aa16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 BLVRBP30043 206 aaPredicted RBP16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 CLDN12P56749 244 aa16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 Q3ZCU0 254 aa16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 OR52L2PQ8NGH6 319 aa16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 RASL11BQ9BPW5 248 aa16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 LPAR5Q9H1C0 372 aa16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 RAB9BQ9NP90 201 aa16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 KCNIP1Q9NZI2 227 aa16.51■□□□□ 0.23
RHBDD3-202ENST00000406335 SOCS1O15524 211 aa16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 ARSBP15848 533 aa16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 GPR12P47775 334 aa16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 CDX1P47902 265 aaPredicted RBP16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 RAB11BQ15907 218 aa16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 TMEM30BQ3MIR4 351 aa16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 RTN4IP1Q8WWV3 396 aaPredicted RBP16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 RCHY1Q96PM5 261 aa16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 OR2S2Q9NQN1 319 aa16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 SCOCQ9UIL1 159 aa16.5■□□□□ 0.23
RHBDD3-202ENST00000406335 SHISA3A0PJX4 238 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 ELANEP08246 267 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 VDAC1P21796 283 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 IL3RAP26951 378 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 PPP1CCP36873 323 aaKnown RBP16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 GABARAPL2P60520 117 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 FOXE3Q13461 319 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 EBI3Q14213 229 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 MORN2Q502X0 79 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 TGIF2LXQ8IUE1 241 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 EAF1Q96JC9 268 aaPredicted RBP16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 ABCG5Q9H222 651 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 LIN7CQ9NUP9 197 aaKnown RBP16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 PLEKHJ1Q9NW61 149 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 V9GY05 133 aa16.49■□□□□ 0.23
RHBDD3-202ENST00000406335 ZNF736B4DX44 427 aaPredicted RBP16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 ZNF137PP52743 207 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 PLA2G7Q13093 441 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 HMGN3Q15651 99 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 ZNF554Q86TJ5 538 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 IZUMO1Q8IYV9 350 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 OR11H1Q8NG94 326 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 OR2T10Q8NGZ9 312 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 HDHD3Q9BSH5 251 aaPredicted RBP16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 URM1Q9BTM9 101 aaKnown RBP16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 ZMAT4Q9H898 229 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 NDUFB11Q9NX14 153 aa16.48■□□□□ 0.23
RHBDD3-202ENST00000406335 DENRO43583 198 aaKnown RBP16.47■□□□□ 0.23
RHBDD3-202ENST00000406335 NAPSAO96009 420 aa16.47■□□□□ 0.23
RHBDD3-202ENST00000406335 TMEM50BP56557 158 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms