RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 LCNL1Q6ZST4 164 aa12.07□□□□□ -0.48
TPM1-207ENST00000403994 ZNF695Q8IW36 515 aa12.07□□□□□ -0.48
TPM1-207ENST00000403994 TMEM203Q969S6 136 aa12.07□□□□□ -0.48
TPM1-207ENST00000403994 P2RX4Q99571 388 aa12.07□□□□□ -0.48
TPM1-207ENST00000403994 GFI1Q99684 422 aa12.07□□□□□ -0.48
TPM1-207ENST00000403994 ANKRD60Q9BZ19 345 aa12.07□□□□□ -0.48
TPM1-207ENST00000403994 ZFP57Q9NU63 452 aa12.07□□□□□ -0.48
TPM1-207ENST00000403994 DNAH9Q9NYC9 4486 aa12.07□□□□□ -0.48
TPM1-207ENST00000403994 SAA2-SAA4A0A096LPE2 208 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 RRP9O43818 475 aaKnown RBP12.06□□□□□ -0.48
TPM1-207ENST00000403994 YPEL1O60688 119 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 RGS11O94810 467 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 RPLP1P05386 114 aaKnown RBP12.06□□□□□ -0.48
TPM1-207ENST00000403994 SAA2P0DJI9 122 aaPredicted RBP12.06□□□□□ -0.48
TPM1-207ENST00000403994 CD37P11049 281 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 SLC2A2P11168 524 aaPredicted RBP12.06□□□□□ -0.48
TPM1-207ENST00000403994 HOXD3P31249 432 aaPredicted RBP12.06□□□□□ -0.48
TPM1-207ENST00000403994 SOX6P35712 828 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 OR3A3P47888 321 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 FOXE3Q13461 319 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 P2RY14Q15391 338 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 LY6G6FQ5SQ64 297 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 TMEM91Q6ZNR0 172 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 ZNF833PQ6ZTB9 187 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 RNF152Q8N8N0 203 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 OR2AK2Q8NG84 335 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 GALMQ96C23 342 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 YPEL2Q96QA6 119 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 FAAP24Q9BTP7 215 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 GON7Q9BXV9 100 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 GPR61Q9BZJ8 451 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 IFI27L2Q9H2X8 130 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 DUSP21Q9H596 190 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 TPRKBQ9Y3C4 175 aa12.06□□□□□ -0.48
TPM1-207ENST00000403994 RGS10O43665 173 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 HSMCR30P0CW71 290 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 MYCNOSP40205 109 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 TPBGQ13641 420 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 PNLIPRP3Q17RR3 467 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 DEFB136Q30KP8 78 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
TPM1-207ENST00000403994 ZNF880Q6PDB4 577 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 IL1F10Q8WWZ1 152 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 DUX3Q96PT4 197 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 NABP2Q9BQ15 211 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 LPAR5Q9H1C0 372 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 CHMP1AQ9HD42 196 aaPredicted RBP12.05□□□□□ -0.48
TPM1-207ENST00000403994 ABRACLQ9P1F3 81 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 ZNF107Q9UII5 783 aaPredicted RBP12.05□□□□□ -0.48
TPM1-207ENST00000403994 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 TENM3Q9P273 2699 aa12.05□□□□□ -0.48
TPM1-207ENST00000403994 WI2-2373I1.2A0A1W2PRP0 233 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 SLC17A2O00624 439 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 IGHG4P01861 327 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 IGF1P05019 195 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 VDAC1P21796 283 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 CRHBPP24387 322 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 CNTFRP26992 372 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 BLVRBP30043 206 aaPredicted RBP12.04□□□□□ -0.48
TPM1-207ENST00000403994 ACTBP60709 375 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 MLLT11Q13015 90 aaPredicted RBP12.04□□□□□ -0.48
TPM1-207ENST00000403994 FAM71F2Q6NXP2 309 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 DPF1Q92782 380 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 HDHD3Q9BSH5 251 aaPredicted RBP12.04□□□□□ -0.48
TPM1-207ENST00000403994 PARP12Q9H0J9 701 aaKnown RBP12.04□□□□□ -0.48
TPM1-207ENST00000403994 PLGRKTQ9HBL7 147 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 ISYNA1Q9NPH2 558 aa12.04□□□□□ -0.48
TPM1-207ENST00000403994 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 ARL6IP5O75915 188 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 HLA-DRB1P01911 266 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 ELANEP08246 267 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 ARSBP15848 533 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 CPEP16870 476 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 PSMA1P25786 263 aaKnown RBP12.03□□□□□ -0.48
TPM1-207ENST00000403994 TRAM1Q15629 374 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 RAB11BQ15907 218 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 PRSS48Q7RTY5 328 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 OR8U1Q8NH10 309 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 SETD6Q8TBK2 473 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 RITA1Q96K30 269 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 KCTD7Q96MP8 289 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 MCRIP2Q9BUT9 160 aaKnown RBP12.03□□□□□ -0.48
TPM1-207ENST00000403994 PLEKHJ1Q9NW61 149 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 STEAP1Q9UHE8 339 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 AK3Q9UIJ7 227 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 LRRC42Q9Y546 428 aa12.03□□□□□ -0.48
TPM1-207ENST00000403994 TRBV6-6A0A0A6YYG2 114 aa12.02□□□□□ -0.49
TPM1-207ENST00000403994 FOXI3A8MTJ6 420 aaPredicted RBP12.02□□□□□ -0.49
TPM1-207ENST00000403994 CCL24O00175 119 aa12.02□□□□□ -0.49
TPM1-207ENST00000403994 NBR2O15453 112 aa12.02□□□□□ -0.49
TPM1-207ENST00000403994 SOCS1O15524 211 aa12.02□□□□□ -0.49
TPM1-207ENST00000403994 CALRP27797 417 aaKnown RBP12.02□□□□□ -0.49
TPM1-207ENST00000403994 PSMB8P28062 276 aa12.02□□□□□ -0.49
TPM1-207ENST00000403994 MAP2K4P45985 399 aa12.02□□□□□ -0.49
TPM1-207ENST00000403994 CDX1P47902 265 aaPredicted RBP12.02□□□□□ -0.49
TPM1-207ENST00000403994 RAB25P57735 213 aa12.02□□□□□ -0.49
TPM1-207ENST00000403994 HLA-DRB3P79483 266 aa12.02□□□□□ -0.49
TPM1-207ENST00000403994 FABP5Q01469 135 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms