RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 Q6ZS49 121 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 DTX3Q8N9I9 347 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 ZNF439Q8NDP4 499 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 OR2AK2Q8NG84 335 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 CT45A3Q8NHU0 189 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 NUDCD2Q8WVJ2 157 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 MAFIPQ8WZ33 124 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 TOMM40LQ969M1 308 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 CHIAQ9BZP6 476 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 CCDC59Q9P031 241 aaKnown RBP11.06□□□□□ -0.64
VPREB1-202ENST00000403807 RSL24D1Q9UHA3 163 aaKnown RBP11.06□□□□□ -0.64
VPREB1-202ENST00000403807 SLC23A1Q9UHI7 598 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 VPREB3Q9UKI3 123 aa11.06□□□□□ -0.64
VPREB1-202ENST00000403807 ZNF701M0R085 212 aaPredicted RBP11.05□□□□□ -0.64
VPREB1-202ENST00000403807 ITGB1BP1O14713 200 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 SLC31A2O15432 143 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 RGS5O15539 181 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 DIRAS3O95661 229 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 LPLP06858 475 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 ELK1P19419 428 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 CBX5P45973 191 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 TAS2R20P59543 309 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 GNMTQ14749 295 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 OR10J5Q8NHC4 309 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 PIFOQ8TCI5 191 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 EDARADDQ8WWZ3 215 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 ABHD14AQ9BUJ0 271 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 GHITMQ9H3K2 345 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 NDUFA13Q9P0J0 144 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 PITPNC1Q9UKF7 332 aa11.05□□□□□ -0.64
VPREB1-202ENST00000403807 MRPS7Q9Y2R9 242 aaKnown RBP11.05□□□□□ -0.64
VPREB1-202ENST00000403807 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 HSD17B6O14756 317 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 BET1O15155 118 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 SSX5O60225 188 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 CTXN2P0C2S0 81 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 PRSS3P35030 304 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 RPL15P61313 204 aaKnown RBP11.04□□□□□ -0.64
VPREB1-202ENST00000403807 ZNF816Q0VGE8 651 aaPredicted RBP11.04□□□□□ -0.64
VPREB1-202ENST00000403807 LY6EQ16553 131 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 OR8H3Q8N146 312 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 LYG1Q8N1E2 194 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.04□□□□□ -0.64
VPREB1-202ENST00000403807 C19orf24Q9BVV8 132 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 TOLLIPQ9H0E2 274 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 RBM38Q9H0Z9 239 aaKnown RBP11.04□□□□□ -0.64
VPREB1-202ENST00000403807 RAB18Q9NP72 206 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 OR1A1Q9P1Q5 309 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 ADAM30Q9UKF2 790 aa11.04□□□□□ -0.64
VPREB1-202ENST00000403807 DNHD1Q96M86 4753 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 IGKV1D-8A0A087WSZ0 117 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 TRBV6-7A0A0A0MS04 114 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 CTDSP2O14595 271 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 GPR137BO60478 399 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 HLA-DQB1P01920 261 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 PTHLHP12272 177 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 ZNF137PP52743 207 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 ACTG1P63261 375 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 DIAPH2-AS1Q14236 149 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 HERPUD1Q15011 391 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 IGSF11Q5DX21 431 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 CNIH2Q6PI25 160 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 LIAT1Q6ZQX7 453 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 MOB3BQ86TA1 216 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 HOGA1Q86XE5 327 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 SPATA3Q8NHX4 192 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 GCDHQ92947 438 aaPredicted RBP11.03□□□□□ -0.64
VPREB1-202ENST00000403807 ST6GALNAC6Q969X2 333 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 GINS4Q9BRT9 223 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 CABLES2Q9BTV7 478 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 C11orf54Q9H0W9 315 aaPredicted RBP11.03□□□□□ -0.64
VPREB1-202ENST00000403807 RDH8Q9NYR8 311 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 PIPOXQ9P0Z9 390 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 ANXA10Q9UJ72 324 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 TCF19Q9Y242 345 aa11.03□□□□□ -0.64
VPREB1-202ENST00000403807 RAB29O14966 203 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 TXNL1O43396 289 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 TPPPO94811 219 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 FAM106CPP0CH98 169 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 DHRS7BQ6IAN0 325 aaPredicted RBP11.02□□□□□ -0.65
VPREB1-202ENST00000403807 THNSL2Q86YJ6 484 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 TGIF2LXQ8IUE1 241 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 GVQW1Q8N7I0 195 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 C15orf40Q8WUR7 153 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 CAPSLQ8WWF8 208 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 RTN4IP1Q8WWV3 396 aaPredicted RBP11.02□□□□□ -0.65
VPREB1-202ENST00000403807 DGCR14Q96DF8 476 aaKnown RBP11.02□□□□□ -0.65
VPREB1-202ENST00000403807 S1PR3Q99500 378 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 SLIRPQ9GZT3 109 aaKnown RBP11.02□□□□□ -0.65
VPREB1-202ENST00000403807 C6orf62Q9GZU0 229 aaPredicted RBP11.02□□□□□ -0.65
VPREB1-202ENST00000403807 IFT46Q9NQC8 304 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 EXTL2Q9UBQ6 330 aa11.02□□□□□ -0.65
VPREB1-202ENST00000403807 IGHV1-3A0A0C4DH29 117 aa11.01□□□□□ -0.65
VPREB1-202ENST00000403807 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
VPREB1-202ENST00000403807 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
VPREB1-202ENST00000403807 A6NDX4 124 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms