RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 GDF1P27539 372 aa16.83■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF525Q8N782 197 aa16.83■□□□□ 0.28
CCDC47-202ENST00000403162 CA5BP1Q8WTZ4 195 aa16.83■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF665Q9H7R5 613 aa16.83■□□□□ 0.28
CCDC47-202ENST00000403162 ZFP92A6NM28 416 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF891A8MT65 544 aaPredicted RBP16.82■□□□□ 0.28
CCDC47-202ENST00000403162 NPIPB11E5RHQ5 1161 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 PTBP3O95758 552 aaKnown RBP16.82■□□□□ 0.28
CCDC47-202ENST00000403162 HLA-HP01893 362 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF726P1Q15940 193 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 CDPF1Q6NVV7 123 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 Q6ZRM9 215 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 RCC1LQ96I51 464 aaKnown RBP16.82■□□□□ 0.28
CCDC47-202ENST00000403162 SDF2L1Q9HCN8 221 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 DEGS1O15121 323 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 SYNGR2O43760 224 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 TRGC1P0CF51 173 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 PLA2G5P39877 138 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 CD81P60033 236 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 SERF2P84101 59 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 C9orf152Q5JTZ5 239 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 OR2T2Q6IF00 324 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 ABHD5Q8WTS1 349 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 HIST1H2AAQ96QV6 131 aa16.82■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF552Q9H707 407 aaPredicted RBP16.82■□□□□ 0.28
CCDC47-202ENST00000403162 ERRFI1Q9UJM3 462 aaPredicted RBP16.82■□□□□ 0.28
CCDC47-202ENST00000403162 TRBV24-1A0A075B6N3 115 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 TRAV24A0A0B4J272 114 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 IGKV1-39P01597 117 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 IGKV1D-39P04432 117 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 RD3LP0DJH9 198 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 CCL2P13500 99 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 HIST1H1BP16401 226 aaKnown RBP16.81■□□□□ 0.28
CCDC47-202ENST00000403162 OR10V1Q8NGI7 309 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 RNASE11Q8TAA1 199 aaKnown RBP16.81■□□□□ 0.28
CCDC47-202ENST00000403162 OR5P3Q8WZ94 311 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 FRZBQ92765 325 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 PARD6GQ9BYG4 376 aaPredicted RBP16.81■□□□□ 0.28
CCDC47-202ENST00000403162 PRRG4Q9BZD6 226 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 GPR61Q9BZJ8 451 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 PRDM13Q9H4Q3 707 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 VSIRQ9H7M9 311 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 CACNG5Q9UF02 275 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 OR14J1Q9UGF5 321 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 ASPMQ8IZT6 3477 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 A0A096LPE4 126 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 A0A1W2PPZ6 126 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 PINLYPA6NC86 204 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 PHOX2AO14813 284 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 LRRC75BQ2VPJ9 315 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 GFI1BQ5VTD9 330 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 LCN15Q6UWW0 184 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 PSENENQ9NZ42 101 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 CELSR3Q9NYQ7 3312 aa16.81■□□□□ 0.28
CCDC47-202ENST00000403162 OR5H1A6NKK0 313 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 OPN1MWP04001 364 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 OPN1MW2P0DN77 364 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 OPN1MW3P0DN78 364 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 MDH2P40926 338 aaKnown RBP16.8■□□□□ 0.28
CCDC47-202ENST00000403162 HBG1P69891 147 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 HBG2P69892 147 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 ARL16Q0P5N6 197 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 PMS2P11Q13670 270 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 IZUMO4Q1ZYL8 232 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 ABHD17BQ5VST6 288 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 MRGPRGQ86SM5 289 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 CTDSP1Q9GZU7 261 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 GFOD1Q9NXC2 390 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 VAX2Q9UIW0 290 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 SPTBN4Q9H254 2564 aa16.8■□□□□ 0.28
CCDC47-202ENST00000403162 CD300LBA8K4G0 201 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 HS3ST1O14792 307 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 ZNHIT1O43257 154 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 IGLV2-14P01704 120 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 C9orf135Q5VTT2 229 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 SSX7Q7RTT5 188 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 HAPLN4Q86UW8 402 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF573Q86YE8 665 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 RDH5Q92781 318 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 DOCK10Q96BY6 2186 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF503-AS2A6NEH8 195 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.79■□□□□ 0.28
CCDC47-202ENST00000403162 METTL15P1P0C7V9 234 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 CYB561P49447 251 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 TMEM41BQ5BJD5 291 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 FAM58AQ8N1B3 248 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 PINX1Q96BK5 328 aaKnown RBP16.79■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF488Q96MN9 340 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 LRFN1Q9P244 771 aa16.79■□□□□ 0.28
CCDC47-202ENST00000403162 OR5B21A6NL26 309 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 NGFP01138 241 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 IFNA1P01562 189 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 IGKV1-5P01602 117 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 IAPPP10997 89 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 DEFA6Q01524 100 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 DEFB109BQ30KR1 87 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 POM121L2Q96KW2 1035 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 ABI3Q9P2A4 366 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 GNG3P63215 75 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 ZNF600Q6ZNG1 722 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms