RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 RBM14Q96PK6 669 aaKnown RBP15.36■□□□□ 0.05
RTN4-207ENST00000402434 ZNF702PQ9H963 129 aa15.36■□□□□ 0.05
RTN4-207ENST00000402434 SCGNO76038 276 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 SCTP09683 121 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 REG1BP48304 166 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 MRPS15P82914 257 aaKnown RBP15.35■□□□□ 0.05
RTN4-207ENST00000402434 C11orf88Q6PI97 169 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 OR2T6Q8NHC8 308 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 CAPSLQ8WWF8 208 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 ABHD14AQ9BUJ0 271 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 RHBDL2Q9NX52 303 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 SIGLEC9Q9Y336 463 aa15.35■□□□□ 0.05
RTN4-207ENST00000402434 A0A075B6Q4 140 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 TRDCB7Z8K6 153 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 ITGB1BP1O14713 200 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 SNRNP70P08621 437 aaKnown RBP15.34■□□□□ 0.05
RTN4-207ENST00000402434 FCGR3AP08637 254 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 KRTAP10-3P60369 221 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 BLCAPP62952 87 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 EBI3Q14213 229 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 CDNFQ49AH0 187 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 ODF3L1Q8IXM7 274 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 OR5H6Q8NGV6 325 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 SLC25A38Q96DW6 304 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 CITED1Q99966 193 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 SLC25A33Q9BSK2 321 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 MRPS26Q9BYN8 205 aaKnown RBP15.34■□□□□ 0.05
RTN4-207ENST00000402434 PRSS22Q9GZN4 317 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 SPATA2Q9UM82 520 aa15.34■□□□□ 0.05
RTN4-207ENST00000402434 IGKV1-6A0A0C4DH72 117 aa15.33■□□□□ 0.05
RTN4-207ENST00000402434 TXNL1O43396 289 aa15.33■□□□□ 0.05
RTN4-207ENST00000402434 LANCL1O43813 399 aa15.33■□□□□ 0.05
RTN4-207ENST00000402434 ZBTB25P24278 435 aa15.33■□□□□ 0.05
RTN4-207ENST00000402434 SRSF4Q08170 494 aaKnown RBP15.33■□□□□ 0.05
RTN4-207ENST00000402434 SRSF7Q16629 238 aaKnown RBP eCLIP15.33■□□□□ 0.05
RTN4-207ENST00000402434 MOB3BQ86TA1 216 aa15.33■□□□□ 0.05
RTN4-207ENST00000402434 LYG1Q8N1E2 194 aa15.33■□□□□ 0.05
RTN4-207ENST00000402434 OR2AK2Q8NG84 335 aa15.33■□□□□ 0.05
RTN4-207ENST00000402434 AMY1AP04745 511 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 AMY2AP04746 511 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 TFAP2AP05549 437 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 NCS1P62166 190 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 ARFRP1Q13795 201 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 KIR2DS1Q14954 304 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 HACD4Q5VWC8 232 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 Q6ZS46 218 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 TGIF2LXQ8IUE1 241 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 IZUMO1Q8IYV9 350 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 OR4A4PQ8NGN8 299 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 SLC25A46Q96AG3 418 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 AGMATQ9BSE5 352 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 IFI27L2Q9H2X8 130 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 SERTAD4Q9NUC0 356 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 SLC23A1Q9UHI7 598 aa15.33■□□□□ 0.04
RTN4-207ENST00000402434 ELF5Q9UKW6 265 aaPredicted RBP15.33■□□□□ 0.04
RTN4-207ENST00000402434 M0QZK8 103 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 DIRAS3O95661 229 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 IGKV1D-33P01593 117 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 IGKV1-33P01594 117 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 LPLP06858 475 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 GSTP1P09211 210 aaKnown RBP15.32■□□□□ 0.04
RTN4-207ENST00000402434 CD1BP29016 333 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 ALDH3B2P48448 385 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 HERPUD1Q15011 391 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 ZNF260Q3ZCT1 412 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 Q6ZS49 121 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 ANKRD13BQ86YJ7 626 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 SGMS2Q8NHU3 365 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 TOLLIPQ9H0E2 274 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 GHITMQ9H3K2 345 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 OR1A1Q9P1Q5 309 aa15.32■□□□□ 0.04
RTN4-207ENST00000402434 A0A0A6YYH2 397 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 A6NJ64 397 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 FABP7O15540 132 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 DTYMKP23919 212 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 CEACAM6P40199 344 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 SERPINB10P48595 397 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 VBP1P61758 197 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 HES1Q14469 280 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 Q8N6K4 173 aa15.31■□□□□ 0.04
RTN4-207ENST00000402434 PARP12Q9H0J9 701 aaKnown RBP15.31■□□□□ 0.04
RTN4-207ENST00000402434 ZNF230Q9UIE0 474 aaPredicted RBP15.31■□□□□ 0.04
RTN4-207ENST00000402434 IGHV3-72A0A0B4J1Y9 119 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 HSPA12AO43301 675 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 GABARAPO95166 117 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 TMEM11P17152 192 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 TALDO1P37837 337 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 PITPNAQ00169 270 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 CTF1Q16619 201 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 PNLIPRP3Q17RR3 467 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 ZNF833PQ6ZTB9 187 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 EDARADDQ8WWZ3 215 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 EAF1Q96JC9 268 aaPredicted RBP15.3■□□□□ 0.04
RTN4-207ENST00000402434 CABLES2Q9BTV7 478 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 C11orf54Q9H0W9 315 aaPredicted RBP15.3■□□□□ 0.04
RTN4-207ENST00000402434 ABCG5Q9H222 651 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 DCSTAMPQ9H295 470 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 PIPOXQ9P0Z9 390 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 MOB4Q9Y3A3 225 aa15.3■□□□□ 0.04
RTN4-207ENST00000402434 SAA2-SAA4A0A096LPE2 208 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms