RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 IQCF6A8MYZ5 107 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 CYB5R3P00387 301 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-202ENST00000399804 MBPP02686 304 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-202ENST00000399804 IGF2RP11717 2491 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 CD40P25942 277 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 NHLH2Q02577 135 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 TMEM88Q6PEY1 159 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 ZNRF1Q8ND25 227 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 PRSS33Q8NF86 280 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 R3HDM4Q96D70 268 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 STARD4Q96DR4 205 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 POMT1Q9Y6A1 747 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 SPG11Q96JI7 2443 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 PRR14LQ5THK1 2151 aa11.93□□□□□ -0.5
SCAF4-202ENST00000399804 CYB5BO43169 146 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 DYNLT3P51808 116 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 FAM201AQ5SY85 155 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 LHFPL5Q8TAF8 219 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 SNX22Q96L94 193 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 RAB1BQ9H0U4 201 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 CEP295Q9C0D2 2601 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 F8VVB4 439 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 F8VWA3 439 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 WT1P19544 449 aaPredicted RBP11.92□□□□□ -0.5
SCAF4-202ENST00000399804 GNB1P62873 340 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 EWSR1Q01844 656 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCAF4-202ENST00000399804 SLC38A11Q08AI6 406 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 ZBTB34Q8NCN2 500 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 RNF166Q96A37 237 aaPredicted RBP11.92□□□□□ -0.5
SCAF4-202ENST00000399804 SPSB4Q96A44 273 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 SPRY4Q9C004 299 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 C19orf12Q9NSK7 152 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 UMAD1C9J7I0 102 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 LILRA1O75019 489 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 COX7A1P24310 79 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 UCP3P55916 312 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 PJVKQ0ZLH3 352 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 IZUMO4Q1ZYL8 232 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 STUMQ69YW2 141 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 Q6ZS92 163 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 SSX8Q7RTT4 187 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 MOB3BQ86TA1 216 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 NIPSNAP3BQ9BS92 247 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 ARV1Q9H2C2 271 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 PLSCR4Q9NRQ2 329 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 CISD1Q9NZ45 108 aaKnown RBP11.92□□□□□ -0.5
SCAF4-202ENST00000399804 FAM96BQ9Y3D0 163 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 SHANK1Q9Y566 2161 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 NMBP08949 121 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 RPS2P15880 293 aaKnown RBP11.92□□□□□ -0.5
SCAF4-202ENST00000399804 RAB5BP61020 215 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 TMEM42Q69YG0 159 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 HSD17B10Q99714 261 aaKnown RBP11.92□□□□□ -0.5
SCAF4-202ENST00000399804 UQCC1Q9NVA1 299 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 ZDHHC8Q9ULC8 765 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
SCAF4-202ENST00000399804 A0A1B0GU03 582 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 H0Y980 276 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 FGF7P21781 194 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 SSTR5P35346 364 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 ERHP84090 104 aaKnown RBP11.91□□□□□ -0.5
SCAF4-202ENST00000399804 TCF15Q12870 199 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 TMEM187Q14656 261 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 RTP5Q14D33 572 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 HMGN3Q15651 99 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 RXFP4Q8TDU9 374 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 ZNF581Q9P0T4 197 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 SLC25A10Q9UBX3 287 aaPredicted RBP11.91□□□□□ -0.5
SCAF4-202ENST00000399804 TXNL1O43396 289 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 ZP3P21754 424 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 OR52M1Q8NGK5 317 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 OR4S2Q8NH73 311 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 MEGF10Q96KG7 1140 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 SLC35D1Q9NTN3 355 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 RCC2Q9P258 522 aaKnown RBP11.91□□□□□ -0.5
SCAF4-202ENST00000399804 ONECUT1Q9UBC0 465 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 KPTNQ9Y664 436 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 ACACBO00763 2458 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 CD8AP01732 235 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 ACP7Q6ZNF0 438 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 LINC01560Q8TB33 94 aa11.91□□□□□ -0.5
SCAF4-202ENST00000399804 IGHV1-18A0A0C4DH31 117 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 A0A0U1RQK1 487 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 RNASEK-C17orf49H0YIS7 233 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 DEFA4P12838 97 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 PSMB3P49720 205 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 OR2B8PP59922 312 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 KLRB1Q12918 225 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 RAB1CQ92928 201 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 NKX6-2Q9C056 277 aaPredicted RBP11.9□□□□□ -0.5
SCAF4-202ENST00000399804 PTPRQQ9UMZ3 2332 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 DEDDO75618 318 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 COX5AP20674 150 aa11.9□□□□□ -0.5
SCAF4-202ENST00000399804 DHRS11Q6UWP2 260 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms