RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 HIST1H4GQ99525 98 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 DOCK8Q8NF50 2099 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 H3BTX0 84 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 FFAR1O14842 300 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 LCN2P80188 198 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 KIAA1644Q3SXP7 199 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 GCSAMLQ5JQS6 135 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 SH2D2AQ9NP31 389 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 TRAV8-7A0A075B6U6 113 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 HMSDA8MTL9 139 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 SERPINE3A8MV23 424 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 C1orf185Q5T7R7 199 aa8.16□□□□□ -1.1
ATL3-201ENST00000398868 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.16□□□□□ -1.1
ATL3-201ENST00000398868 TBL2Q9Y4P3 447 aaKnown RBP8.16□□□□□ -1.1
ATL3-201ENST00000398868 DHRS3O75911 302 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 SRD5A2P31213 254 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 KIR2DL1P43626 348 aaPredicted RBP8.15□□□□□ -1.1
ATL3-201ENST00000398868 MRPS11P82912 194 aaKnown RBP8.15□□□□□ -1.1
ATL3-201ENST00000398868 RBM38Q9H0Z9 239 aaKnown RBP8.15□□□□□ -1.1
ATL3-201ENST00000398868 A0A1W2PQF6 199 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 OR2T8A6NH00 312 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 RNF133Q8WVZ7 376 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 MRPL24Q96A35 216 aaKnown RBP8.15□□□□□ -1.1
ATL3-201ENST00000398868 PTX4Q96A99 478 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 RARRES2Q99969 163 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 SHANK3Q9BYB0 1731 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 DPH3P1Q9H4G8 78 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 VAX2Q9UIW0 290 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 AMMECR1Q9Y4X0 333 aaPredicted RBP8.15□□□□□ -1.1
ATL3-201ENST00000398868 SCN7AQ01118 1682 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 CENPVL1A0A0U1RR11 272 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 GRIFINA4D1Z8 144 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 CD74P04233 296 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 RPL30P62888 115 aaKnown RBP8.15□□□□□ -1.1
ATL3-201ENST00000398868 LYZL2Q7Z4W2 148 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 OR4C13Q8NGP0 309 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 MBD3L1Q8WWY6 194 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 ASB10Q8WXI3 467 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 ABHD14BQ96IU4 210 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 GPR27Q9NS67 375 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 DOCK9Q9BZ29 2069 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 CYC1P08574 325 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 PEBP1P30086 187 aaKnown RBP8.15□□□□□ -1.1
ATL3-201ENST00000398868 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 OIT3Q8WWZ8 545 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 MIXL1Q9H2W2 232 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 MANBALQ9NQG1 85 aa8.15□□□□□ -1.1
ATL3-201ENST00000398868 A0A0B4J2E0 115 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 TRBV5-4A0A0C4DH59 114 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 A0A1B0GX12 115 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 GSTZ1O43708 216 aaPredicted RBP8.15□□□□□ -1.11
ATL3-201ENST00000398868 PEX11BO96011 259 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 IGHV4-34P06331 123 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 PPP1CCP36873 323 aaKnown RBP8.15□□□□□ -1.11
ATL3-201ENST00000398868 SGK494Q96LW2 274 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 OR2V2Q96R30 315 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 CACNA1IQ9P0X4 2223 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 DOCK7Q96N67 2140 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 IL13RA2Q14627 380 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 C12orf73Q69YU5 71 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 CENPVQ7Z7K6 275 aaPredicted RBP8.15□□□□□ -1.11
ATL3-201ENST00000398868 C9orf40Q8IXQ3 194 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 RAB40CQ96S21 281 aa8.15□□□□□ -1.11
ATL3-201ENST00000398868 PGA3P0DJD8 388 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 OR8G5Q8NG78 346 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 KLK15Q9H2R5 256 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 SIGLEC7Q9Y286 467 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 ABCA3Q99758 1704 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 LINC00862A6NCI5 91 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 OOEPA6NGQ2 149 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 PLPP2O43688 288 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 UPK3AO75631 287 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 BRS3P32247 399 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 RUNX1Q01196 453 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 FXYD3Q14802 87 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 TM4SF20Q53R12 229 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 KRTCAP3Q53RY4 240 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 OR8I2Q8N0Y5 310 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 HARBI1Q96MB7 349 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 SMPD2O60906 423 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 C1QL1O75973 258 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 CLDN14O95500 239 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 CLDN18P56856 261 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 PAFAH1B2P68402 229 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 SLC25A45Q8N413 288 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 ARRDC1Q8N5I2 433 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 RAB24Q969Q5 203 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 NEU1Q99519 415 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 GGACTQ9BVM4 153 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 CES1P1Q9UKY3 287 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 SCN8AQ9UQD0 1980 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 ERVH48-1M5A8F1 160 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 FDCSPQ8NFU4 85 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 RCC2Q9P258 522 aaKnown RBP8.14□□□□□ -1.11
ATL3-201ENST00000398868 NKX2-6A6NCS4 301 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 FXYD1O00168 92 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 MBPP02686 304 aaPredicted RBP8.14□□□□□ -1.11
ATL3-201ENST00000398868 SGMS2Q8NHU3 365 aa8.14□□□□□ -1.11
ATL3-201ENST00000398868 ZFP30Q9Y2G7 519 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms