RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 OR10Z1Q8NGY1 313 aa11.64□□□□□ -0.55
PRAME-202ENST00000398743 MBD3L2Q8NHZ7 208 aaPredicted RBP11.64□□□□□ -0.55
PRAME-202ENST00000398743 PRELID1Q9Y255 219 aa11.64□□□□□ -0.55
PRAME-202ENST00000398743 CEACAM1P13688 526 aa11.64□□□□□ -0.55
PRAME-202ENST00000398743 HOXA4Q00056 320 aaPredicted RBP11.64□□□□□ -0.55
PRAME-202ENST00000398743 NINJ1Q92982 152 aa11.64□□□□□ -0.55
PRAME-202ENST00000398743 FBXO7Q9Y3I1 522 aa11.64□□□□□ -0.55
PRAME-202ENST00000398743 DMXL1Q9Y485 3027 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 A0A1B0GW64 132 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 IFNL4K9M1U5 179 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 GPR37O15354 613 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 PTBP3O95758 552 aaKnown RBP11.63□□□□□ -0.55
PRAME-202ENST00000398743 HBZP02008 142 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 EIF2S3P41091 472 aaKnown RBP11.63□□□□□ -0.55
PRAME-202ENST00000398743 RUNX1Q01196 453 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 MZT1Q08AG7 82 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 TMEM267Q0VDI3 215 aaPredicted RBP11.63□□□□□ -0.55
PRAME-202ENST00000398743 SEM1Q6ZVN7 128 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 FAM169BQ8N8A8 192 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 COQ2Q96H96 371 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 OR2D2Q9H210 308 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 MLXQ9UH92 298 aa11.63□□□□□ -0.55
PRAME-202ENST00000398743 BTBD17A6NE02 478 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 IFNA5P01569 189 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 AKR1C8PQ5T2L2 129 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 SLC25A24Q6NUK1 477 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 IGFL3Q6UXB1 125 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 OR52L2PQ8NGH6 319 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 MRGPRDQ8TDS7 321 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 ABHD14AQ9BUJ0 271 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 SMDT1Q9H4I9 107 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 KCNJ16Q9NPI9 418 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 PSENENQ9NZ42 101 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 SLC25A15Q9Y619 301 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 A0A1B0GWJ7 208 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 TSPAN9O75954 239 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 IAPPP10997 89 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 TAS2R30P59541 319 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 COL10A1Q03692 680 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 AKIRIN2Q53H80 203 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 KRBOX4Q5JUW0 171 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 FGFRL1Q8N441 504 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 TOLLIPQ9H0E2 274 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 ESRP2Q9H6T0 727 aaKnown RBP11.62□□□□□ -0.55
PRAME-202ENST00000398743 SMCO4Q9NRQ5 59 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 RNF150Q9ULK6 438 aa11.62□□□□□ -0.55
PRAME-202ENST00000398743 URB1O60287 2271 aaKnown RBP11.61□□□□□ -0.55
PRAME-202ENST00000398743 TFF1P04155 84 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 KDF1Q8NAX2 398 aaPredicted RBP11.61□□□□□ -0.55
PRAME-202ENST00000398743 COA4Q9NYJ1 87 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 MMP24Q9Y5R2 645 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 FAM90A26D6RGX4 464 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 TLE4Q04727 773 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 CATR1Q13166 79 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 AWAT1Q58HT5 328 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 SPSB3Q6PJ21 355 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 DPPA3Q6W0C5 159 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 OR2Z1Q8NG97 314 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 LRRC29Q8WV35 223 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 RPS10P5Q9NQ39 176 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 PRELID3BQ9Y3B1 194 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 CACNA1GO43497 2377 aa11.61□□□□□ -0.55
PRAME-202ENST00000398743 RAMP3O60896 148 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 GLIPR1P48060 266 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 HBG1P69891 147 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 HBG2P69892 147 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 CCL20P78556 96 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 ETV3LQ6ZN32 361 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 THNSL2Q86YJ6 484 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 ZNF808Q8N4W9 903 aaPredicted RBP11.6□□□□□ -0.55
PRAME-202ENST00000398743 LURAP1Q96LR2 239 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 KIAA1456Q9P272 454 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 EP300Q09472 2414 aaPredicted RBP11.6□□□□□ -0.55
PRAME-202ENST00000398743 RBFOX3A6NFN3 312 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 M0R036 132 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 PAX6P26367 422 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 SSTR5P35346 364 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 EIF4EBP1Q13541 118 aaPredicted RBP11.6□□□□□ -0.55
PRAME-202ENST00000398743 MSMO1Q15800 293 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 EIF2S3LQ2VIR3 472 aaKnown RBP11.6□□□□□ -0.55
PRAME-202ENST00000398743 TIMM23BQ5SRD1 257 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 FAM53AQ6NSI3 398 aaPredicted RBP11.6□□□□□ -0.55
PRAME-202ENST00000398743 Q6ZS92 163 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 TPRX1Q8N7U7 411 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 OR13A1Q8NGR1 328 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 RXFP4Q8TDU9 374 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 C5orf30Q96GV9 206 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 RARRES2Q99969 163 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 DUSP13Q9UII6 198 aa11.6□□□□□ -0.55
PRAME-202ENST00000398743 LAMA5O15230 3695 aa11.59□□□□□ -0.55
PRAME-202ENST00000398743 SNRNP70P08621 437 aaKnown RBP11.59□□□□□ -0.55
PRAME-202ENST00000398743 OR13C7P0DN81 318 aa11.59□□□□□ -0.55
PRAME-202ENST00000398743 ZNF83P51522 516 aa11.59□□□□□ -0.55
PRAME-202ENST00000398743 RAB2AP61019 212 aa11.59□□□□□ -0.55
PRAME-202ENST00000398743 UBE2KP61086 200 aa11.59□□□□□ -0.55
PRAME-202ENST00000398743 RPL30P62888 115 aaKnown RBP11.59□□□□□ -0.55
PRAME-202ENST00000398743 PAX5Q02548 391 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms