RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 LHX4Q969G2 390 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 ARL11Q969Q4 196 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 KLK11Q9UBX7 282 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 IGKV1D-13A0A0B4J2D9 117 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 SDCBPO00560 298 aaPredicted RBP8.52□□□□□ -1.05
NUP98-205ENST00000397007 IGKV1-13P0DP09 117 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 UCP3P55916 312 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 SUCNR1Q9BXA5 334 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 C11orf54Q9H0W9 315 aaPredicted RBP8.52□□□□□ -1.05
NUP98-205ENST00000397007 YAE1D1Q9NRH1 226 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 PLSCR3Q9NRY6 295 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 SLC23A1Q9UHI7 598 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 TRAPPC2LQ9UL33 140 aa8.52□□□□□ -1.05
NUP98-205ENST00000397007 A0A1W2PQ09 198 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 LSAMPQ13449 338 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 RTN4IP1Q8WWV3 396 aaPredicted RBP8.51□□□□□ -1.05
NUP98-205ENST00000397007 MOB3AQ96BX8 217 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 GALMQ96C23 342 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 A6NDX4 124 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 AMY1AP04745 511 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 AMY2AP04746 511 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 CRYGBP07316 175 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 PRSS3P35030 304 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 BAK1Q16611 211 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 IL17RELQ6ZVW7 336 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 OR5AN1Q8NGI8 311 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 HEXA-AS1Q9H8Q6 139 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 CD3GP09693 182 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 EPHA1P21709 976 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 IFITM3Q01628 133 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 ZNF45Q02386 682 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 DEFB112Q30KQ8 113 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 FAHD2BQ6P2I3 314 aaPredicted RBP8.51□□□□□ -1.05
NUP98-205ENST00000397007 BEST4Q8NFU0 473 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 OR4D10Q8NGI6 311 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 ZFAND2BQ8WV99 257 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 FAHD2AQ96GK7 314 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 ZNF580Q9UK33 172 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 POMT1Q9Y6A1 747 aa8.51□□□□□ -1.05
NUP98-205ENST00000397007 CTXN2P0C2S0 81 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 MECP2P51608 486 aaKnown RBP8.5□□□□□ -1.05
NUP98-205ENST00000397007 C19orf54Q5BKX5 351 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 RSRP1Q9BUV0 290 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 RAB9BQ9NP90 201 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 SAA2-SAA4A0A096LPE2 208 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 RNASE1P07998 156 aaKnown RBP8.5□□□□□ -1.05
NUP98-205ENST00000397007 SAA2P0DJI9 122 aaPredicted RBP8.5□□□□□ -1.05
NUP98-205ENST00000397007 ZBTB25P24278 435 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 PPP1CCP36873 323 aaKnown RBP8.5□□□□□ -1.05
NUP98-205ENST00000397007 PRB3Q04118 309 aaPredicted RBP8.5□□□□□ -1.05
NUP98-205ENST00000397007 CDK10Q15131 360 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 KLK9Q2XQG4 91 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 BVESQ8NE79 360 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 MAFIPQ8WZ33 124 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 KLK9Q9UKQ9 250 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 MDFIC2A0A1B0GVS7 189 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 SPINT2O43291 252 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 CT45A6P0DMU7 189 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 CT45A5P0DMU8 189 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 CT45A7P0DMV0 189 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 RAB7AP51149 207 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 SLC9A3R2Q15599 337 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 PRR18Q8N4B5 295 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 GDPD1Q8N9F7 314 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 OR13C8Q8NGS7 320 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 LEAP2Q969E1 77 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 SLC6A7Q99884 636 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 NABP2Q9BQ15 211 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 OR2W1Q9Y3N9 320 aa8.5□□□□□ -1.05
NUP98-205ENST00000397007 NOL3O60936 208 aaKnown RBP8.49□□□□□ -1.05
NUP98-205ENST00000397007 FGF2P09038 288 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 RPL15P61313 204 aaKnown RBP8.49□□□□□ -1.05
NUP98-205ENST00000397007 SSBP2P81877 361 aaPredicted RBP8.49□□□□□ -1.05
NUP98-205ENST00000397007 BRD3OSQ6XYD6 125 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 ZNF782Q6ZMW2 699 aaPredicted RBP8.49□□□□□ -1.05
NUP98-205ENST00000397007 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 DTX3Q8N9I9 347 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
NUP98-205ENST00000397007 RDH8Q9NYR8 311 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 ZNF221Q9UK13 617 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 hCG_1809904A0A1W2PP81 198 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 A0A1W2PPE2 198 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 A0A1W2PR64 198 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 A0A1W2PRV1 198 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 MEX3AA1L020 520 aaKnown RBP8.49□□□□□ -1.05
NUP98-205ENST00000397007 CD40LGP29965 261 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 RFESDQ8TAC1 157 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 PLA2G10O15496 165 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 NDUFA3O95167 84 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 VENTXO95231 258 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 IGLV2-23P01705 113 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 P0C879 139 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 GNG2P59768 71 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 RND3P61587 244 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 SDHAF2Q9NX18 166 aa8.49□□□□□ -1.05
NUP98-205ENST00000397007 IGHV1-3A0A0C4DH29 117 aa8.48□□□□□ -1.05
NUP98-205ENST00000397007 TXNL1O43396 289 aa8.48□□□□□ -1.05
NUP98-205ENST00000397007 GNRHRP30968 328 aa8.48□□□□□ -1.05
NUP98-205ENST00000397007 ACTBL2Q562R1 376 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms