RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CHST1O43916 411 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF737O75373 536 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 NAPSAO96009 420 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 AKAIN1P0CW23 69 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 KIR2DS4P43632 304 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 IFITM3Q01628 133 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 ASAH1Q13510 395 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 DYRK1AQ13627 763 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 KIR2DS1Q14954 304 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 SRSF7Q16629 238 aaKnown RBP eCLIP8.36□□□□□ -1.07
NEDD8-202ENST00000396828 RGS21Q2M5E4 152 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 C2orf68Q2NKX9 166 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 BEAN1Q3B7T3 259 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 ACTBL2Q562R1 376 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 KRBOX4Q5JUW0 171 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF497Q6ZNH5 498 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 MOB1BQ7L9L4 216 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 HOGA1Q86XE5 327 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 LYG1Q8N1E2 194 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 DYNAPQ8N1N2 210 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 GVQW1Q8N7I0 195 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 POC5Q8NA72 575 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 BEST4Q8NFU0 473 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 HDHD3Q9BSH5 251 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-202ENST00000396828 METTL8Q9H825 291 aaKnown RBP8.36□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF286AQ9HBT8 521 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 ING3Q9NXR8 418 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 KCNIP1Q9NZI2 227 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF230Q9UIE0 474 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-202ENST00000396828 TRAPPC2LQ9UL33 140 aa8.36□□□□□ -1.07
NEDD8-202ENST00000396828 NOTCH3Q9UM47 2321 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 MEIKINA0A087WXM9 373 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 TRBV6-6A0A0A6YYG2 114 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 BTBD17A6NE02 478 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 LYRM1O43325 122 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 MT-ND4P03905 459 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 IFNA6P05013 189 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 FCER2P06734 321 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 NAT1P18440 290 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 HLA-DMAP28067 261 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 ERP29P30040 261 aaKnown RBP8.35□□□□□ -1.07
NEDD8-202ENST00000396828 TAS2R46P59540 309 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 ARPC4P59998 168 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 PAX5Q02548 391 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 AESQ08117 197 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 KLF9Q13886 244 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-202ENST00000396828 EDDM3AQ14507 147 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 HABP2Q14520 560 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-202ENST00000396828 MEF2DQ14814 521 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 RNASE10Q5GAN6 216 aaKnown RBP8.35□□□□□ -1.07
NEDD8-202ENST00000396828 LDLRAD2Q5SZI1 272 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 RSBN1Q5VWQ0 802 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-202ENST00000396828 STEAP1BQ6NZ63 245 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 TRAT1Q6PIZ9 186 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 FAM185AQ8N0U4 392 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 GAPTQ8N292 157 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 ZNF565Q8N9K5 539 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 OR5H2Q8NGV7 314 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 OR4K15Q8NH41 348 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 OR5R1Q8NH85 324 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 PLPPR1Q8TBJ4 325 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 MRPL30Q8TCC3 161 aaKnown RBP8.35□□□□□ -1.07
NEDD8-202ENST00000396828 MEGF9Q9H1U4 602 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 Q9N2K0 584 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 ANXA10Q9UJ72 324 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 ANAPC10Q9UM13 185 aa8.35□□□□□ -1.07
NEDD8-202ENST00000396828 MEX3AA1L020 520 aaKnown RBP8.34□□□□□ -1.07
NEDD8-202ENST00000396828 TRDCB7Z8K6 153 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 DISC1C4P0D8 188 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 RAB3DO95716 219 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 PTTG1O95997 202 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 CD74P04233 296 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 CD3DP04234 171 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 CCL3L1P16619 93 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 OR3A3P47888 321 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 RAB13P51153 203 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 EDDM3BP56851 147 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 HERPUD1Q15011 391 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 C6orf183Q5T699 404 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 NCR3LG1Q68D85 454 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 TMEM200BQ69YZ2 307 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 OR52W1Q6IF63 320 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 Q6ZS49 121 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 LHFPL4Q7Z7J7 247 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 KLHDC1Q8N7A1 406 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 OR5AP2Q8NGF4 316 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 ENKURQ8TC29 256 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 CCDC107Q8WV48 283 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 MAFIPQ8WZ33 124 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 CFHR4Q92496 578 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 NCOR1P1Q9H4R4 102 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 HRASLSQ9HDD0 168 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 RAB9BQ9NP90 201 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 NECAP2Q9NVZ3 263 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 MCUBQ9NWR8 336 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 OR6C3Q9NZP0 311 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 KIF25Q9UIL4 384 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 TBC1D24Q9ULP9 559 aa8.34□□□□□ -1.07
NEDD8-202ENST00000396828 KMT2CQ8NEZ4 4911 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms