RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 RAB1BQ9H0U4 201 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 INSIG2Q9Y5U4 225 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 DIRC3C9JPN6 131 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 OR2A4O95047 310 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 RPLP1P05386 114 aaKnown RBP11.38□□□□□ -0.59
LCA5-202ENST00000392959 SCTP09683 121 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 RPL7P18124 248 aaKnown RBP11.38□□□□□ -0.59
LCA5-202ENST00000392959 BRS3P32247 399 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 LINC01590Q5TEZ4 76 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 NFAM1Q8NET5 270 aaPredicted RBP11.38□□□□□ -0.59
LCA5-202ENST00000392959 CA5BP1Q8WTZ4 195 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 ABHD14BQ96IU4 210 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 OR2A7Q96R45 310 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 ESPL1Q14674 2120 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 KIF13BQ9NQT8 1826 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 C4orf51C9J302 202 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 HPRT1P00492 218 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 ORM1P02763 201 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 GABRA6Q16445 453 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.38□□□□□ -0.59
LCA5-202ENST00000392959 PET117Q6UWS5 81 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 Q8WTZ3 238 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 DUSP15Q9H1R2 295 aaPredicted RBP11.38□□□□□ -0.59
LCA5-202ENST00000392959 PRF1P14222 555 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 LGALS7P47929 136 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 WNT2BQ93097 391 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 SDHCQ99643 169 aaPredicted RBP11.37□□□□□ -0.59
LCA5-202ENST00000392959 IL9P15248 144 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 KLK2P20151 261 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 CD40P25942 277 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 WNT5AP41221 380 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 SUCLG1P53597 346 aaKnown RBP11.37□□□□□ -0.59
LCA5-202ENST00000392959 TPRX1Q8N7U7 411 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 TXNDC17Q9BRA2 123 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 C1RLQ9NZP8 487 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 PIKFYVEQ9Y2I7 2098 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 MPDU1O75352 247 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 NDUFB4O95168 129 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
LCA5-202ENST00000392959 GMPPAQ96IJ6 420 aaPredicted RBP11.37□□□□□ -0.59
LCA5-202ENST00000392959 TMEM204Q9BSN7 226 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 ASCL3Q9NQ33 180 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 DCAF16Q9NXF7 216 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 COL4A1P02462 1669 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 CLDN14O95500 239 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 PRDX2P32119 198 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 PAFAH1B2P68402 229 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 SCGB1D4Q6XE38 83 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 DOLPP1Q86YN1 238 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 CTHRC1Q96CG8 243 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 C5orf66Q9H5L9 145 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 HSPB8Q9UJY1 196 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 LHFPL6Q9Y693 200 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 PXMP4Q9Y6I8 212 aa11.37□□□□□ -0.59
LCA5-202ENST00000392959 H0YL77 283 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 SPRED2Q7Z698 418 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 CACNA1EQ15878 2313 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A10PA6NDY2 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A18PA6NE21 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A16PA6NEW6 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A20PA6NIJ5 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A8PA6NJQ4 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A7PA6NKC0 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A22PA8MWA6 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A12PA8MX19 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A5PA8MXJ8 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A23PA8MXZ1 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A15PP0C7V4 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A13PP0C7W8 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A14PP0C7W9 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A24PP0C7X0 464 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 SLC22A18ASQ8N1D0 253 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 EIF4E3Q8N5X7 224 aaKnown RBP11.36□□□□□ -0.59
LCA5-202ENST00000392959 SMRP1Q8NCR6 262 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM222BQ8WU58 562 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 MS4A5Q9H3V2 200 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 WIPI2Q9Y4P8 454 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 CNOT1A5YKK6 2376 aaKnown RBP11.36□□□□□ -0.59
LCA5-202ENST00000392959 ADAMTSL1Q8N6G6 1762 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 A0A1W2PPE3 182 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 SHISA3A0PJX4 238 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 MGST3O14880 152 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 ADAM11O75078 769 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 MT-ND6P03923 174 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 SMIM10L1P0DMW3 83 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 ZNF137PP52743 207 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 RND1Q92730 232 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 SMIM10Q96HG1 83 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 RHOVQ96L33 236 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 SLC25A33Q9BSK2 321 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 ELOVL1Q9BW60 279 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 FAM206AQ9NX38 181 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 COA4Q9NYJ1 87 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 DOPEY2Q9Y3R5 2298 aa11.36□□□□□ -0.59
LCA5-202ENST00000392959 RAB29O14966 203 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 HIST1H1BP16401 226 aaKnown RBP11.35□□□□□ -0.59
LCA5-202ENST00000392959 RPL31P62899 125 aaKnown RBP11.35□□□□□ -0.59
LCA5-202ENST00000392959 ZNF343Q6P1L6 599 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 APCDD1LQ8NCL9 501 aa11.35□□□□□ -0.59
LCA5-202ENST00000392959 TAF15Q92804 592 aaKnown RBP eCLIP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms