RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 EXT1Q16394 746 aa12.41□□□□□ -0.42
LRRFIP1-204ENST00000392000 CLDN23Q96B33 292 aa12.41□□□□□ -0.42
LRRFIP1-204ENST00000392000 LAMA5O15230 3695 aa12.41□□□□□ -0.42
LRRFIP1-204ENST00000392000 TTC28Q96AY4 2481 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 LY6G6EA0A0G2JKS1 128 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 C1QTNF9BB2RNN3 333 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 EREGO14944 169 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 CYB5R3P00387 301 aaPredicted RBP12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 OR4A8P0C604 315 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 COX6A1P12074 109 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 PMELP40967 661 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 TMEM241Q24JQ0 296 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 SLC35E3Q7Z769 313 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 U3KQA8 63 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 hCG_38984A0A1B0GV85 526 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 LOC102725191A0A1B0GVB3 256 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 PINLYPA6NC86 204 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 DVL1O14640 695 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 G6PCP35575 357 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 RAC1P63000 192 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 ID3Q02535 119 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 TMEM211Q6ICI0 200 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 C1QL4Q86Z23 238 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 IL17BQ9UHF5 180 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 TNCP24821 2201 aa12.4□□□□□ -0.42
LRRFIP1-204ENST00000392000 A0A1B0GU03 582 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 KLF7O75840 302 aaPredicted RBP12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 GZMHP20718 246 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 FGF7P21781 194 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 CRYGSP22914 178 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 SLC38A11Q08AI6 406 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 IL24Q13007 206 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 C10orf128Q5T292 105 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 MRPL14Q6P1L8 145 aaKnown RBP12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 MRPL30Q8TCC3 161 aaKnown RBP12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 GTF3AQ92664 365 aaKnown RBP12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 SLC31A2O15432 143 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 FOSL1P15407 271 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 GNB2P62879 340 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 M1APQ8TC57 530 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 DNASE2BQ8WZ79 361 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 DEPPQ9NTK1 212 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 PTPRZ1P23471 2315 aaPredicted RBP12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 CBR3O75828 277 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 GZMBP10144 247 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 OTX1P32242 354 aaPredicted RBP12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 THBS3P49746 956 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 UCP2P55851 309 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 NMSQ5H8A3 153 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 GCSAMLQ5JQS6 135 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 LINC00696Q6ZRV3 163 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 TCF23Q7RTU1 214 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 SPEM1Q8N4L4 309 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 LRTM2Q8N967 370 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 OR1P1Q8NH06 330 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 SDF2L1Q9HCN8 221 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 PITPNC1Q9UKF7 332 aa12.39□□□□□ -0.43
LRRFIP1-204ENST00000392000 OR6C6A6NF89 314 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 DEGS1O15121 323 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 IFNA1P01562 189 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 EDDM3BP56851 147 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 ZNF709Q8N972 641 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 CPT1CQ8TCG5 803 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 SIRT7Q9NRC8 400 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 KIR2DS1A0A191URI9 304 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 A6NNC1 897 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 ETV2O00321 342 aaPredicted RBP12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 CEACAM6P40199 344 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 KIR2DS4P43632 304 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 PSMB3P49720 205 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 HBG1P69891 147 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 HBG2P69892 147 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 KIR2DS1Q14954 304 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 TUSC5Q8IXB3 177 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 PARLQ9H300 379 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 OR51I2Q9H344 312 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 DECR2Q9NUI1 292 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 IGKV1D-33P01593 117 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 IGKV1-33P01594 117 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 IGLV3-1P01715 115 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 SERPINA7P05543 415 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 CTSSP25774 331 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 ZNF124Q15973 351 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 SNIP1Q8TAD8 396 aaKnown RBP12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 SAP25Q8TEE9 199 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 FAM103A1Q9BTL3 118 aaKnown RBP12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 DDA1Q9BW61 102 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 HINT2Q9BX68 163 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 VAX2Q9UIW0 290 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 SIT1Q9Y3P8 196 aa12.38□□□□□ -0.43
LRRFIP1-204ENST00000392000 IGLV3-32A0A0A0MS00 114 aa12.37□□□□□ -0.43
LRRFIP1-204ENST00000392000 ZNF25P17030 456 aaPredicted RBP12.37□□□□□ -0.43
LRRFIP1-204ENST00000392000 FOLR3P41439 243 aa12.37□□□□□ -0.43
LRRFIP1-204ENST00000392000 RAC3P60763 192 aa12.37□□□□□ -0.43
LRRFIP1-204ENST00000392000 TMEM41BQ5BJD5 291 aa12.37□□□□□ -0.43
LRRFIP1-204ENST00000392000 FFAR4Q5NUL3 377 aa12.37□□□□□ -0.43
LRRFIP1-204ENST00000392000 RPP25LQ8N5L8 163 aaKnown RBP12.37□□□□□ -0.43
LRRFIP1-204ENST00000392000 IMMP1LQ96LU5 166 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms