RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 ZNF816Q0VGE8 651 aaPredicted RBP12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 ZNF260Q3ZCT1 412 aa12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 AWAT1Q58HT5 328 aa12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 CT45A1Q5HYN5 189 aa12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 C5orf24Q7Z6I8 188 aa12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 SAMD12Q8N8I0 201 aa12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 OR2AK2Q8NG84 335 aa12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 OR4A4PQ8NGN8 299 aa12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 CT45A3Q8NHU0 189 aa12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 S100A16Q96FQ6 103 aaKnown RBP12.1□□□□□ -0.47
IGHV3-53-201ENST00000390627 COL6A5A8TX70 2615 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 TRAV18A0A075B6X5 111 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 A0A1B0GUS0 222 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 A0A1W2PPI3 338 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 TMEM235A6NFC5 223 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 FABP7O15540 132 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 TXNL1O43396 289 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 DIRAS3O95661 229 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 ZNF134P52741 427 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 TMBIM6P55061 237 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 Q6ZS49 121 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 LYG1Q8N1E2 194 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 DTX3Q8N9I9 347 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 EDARADDQ8WWZ3 215 aa12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 RANBP3Q9H6Z4 567 aaPredicted RBP12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 ELF5Q9UKW6 265 aaPredicted RBP12.09□□□□□ -0.47
IGHV3-53-201ENST00000390627 ITGB1BP1O14713 200 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 TIMM23O14925 209 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 FAM106CPP0CH98 169 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 REG1BP48304 166 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 RELBQ01201 579 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 DIAPH2-AS1Q14236 149 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 MZT2AQ6P582 158 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 C16orf82Q7Z2V1 217 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 TMEM219Q86XT9 240 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 TGIF2LXQ8IUE1 241 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 OR56B4Q8NH76 319 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 NUDCD2Q8WVJ2 157 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 CAPSLQ8WWF8 208 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 RTN4IP1Q8WWV3 396 aaPredicted RBP12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 ST6GALNAC6Q969X2 333 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 AKR1E2Q96JD6 320 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 CMTM3Q96MX0 182 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 CABLES2Q9BTV7 478 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 NPFFR1Q9GZQ6 430 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 BEX1Q9HBH7 125 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 OR1A1Q9P1Q5 309 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 COMMD3Q9UBI1 195 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 ZNF230Q9UIE0 474 aaPredicted RBP12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 MMP24Q9Y5R2 645 aa12.08□□□□□ -0.48
IGHV3-53-201ENST00000390627 IGHV1-3A0A0C4DH29 117 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 XRCC3O43542 346 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 LANCL1O43813 399 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 CHST1O43916 411 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 TSPAN9O75954 239 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 ZNF182P17025 639 aaPredicted RBP12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 SOX6P35712 828 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 CEACAM6P40199 344 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 TMEM69Q5SWH9 247 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 CCBE1Q6UXH8 406 aaPredicted RBP12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 Q6ZSV7 163 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 MOB3BQ86TA1 216 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 THNSL2Q86YJ6 484 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 IZUMO1Q8IYV9 350 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 DRAM1Q8N682 238 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 OR4C13Q8NGP0 309 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 MAFIPQ8WZ33 124 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 TAF15Q92804 592 aaKnown RBP eCLIP12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 GHITMQ9H3K2 345 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 PIPOXQ9P0Z9 390 aa12.07□□□□□ -0.48
IGHV3-53-201ENST00000390627 IGKV1-6A0A0C4DH72 117 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 APOA1P02647 267 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 GSTT2P0CG29 244 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 GSTT2BP0CG30 244 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 MDKP21741 143 aaPredicted RBP12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 CD24P25063 80 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 HABP2Q14520 560 aaPredicted RBP12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 HERPUD1Q15011 391 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 FAM71F2Q6NXP2 309 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 C3orf56Q8N813 242 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 OR10J5Q8NHC4 309 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 CFHR4Q92496 578 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 ST6GALNAC5Q9BVH7 336 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 IFI27L2Q9H2X8 130 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 C16orf95Q9H693 158 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 AUNIPQ9H7T9 357 aa12.06□□□□□ -0.48
IGHV3-53-201ENST00000390627 SAA2-SAA4A0A096LPE2 208 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 TRBV6-7A0A0A0MS04 114 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 SMIM31A0A1B0GVY4 71 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 CLPSL1A2RUU4 121 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 FAM90A9PA6NNJ1 464 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 RAB29O14966 203 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 BET1O15155 118 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 ST8SIA5O15466 376 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 SSX5O60225 188 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 OR2F2O95006 317 aa12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 EIF4EP06730 217 aaKnown RBP12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 SNRNP70P08621 437 aaKnown RBP12.05□□□□□ -0.48
IGHV3-53-201ENST00000390627 CTXN2P0C2S0 81 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms