RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PPP1CCP36873 323 aaKnown RBP9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 VEGFCP49767 419 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 KCTD21Q4G0X4 260 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 HES5Q5TA89 166 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 C22orf42Q6IC83 251 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 MOB1BQ7L9L4 216 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 MOB3BQ86TA1 216 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 NDUFA11Q86Y39 141 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 OR56B1Q8NGI3 324 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 PTX4Q96A99 478 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 ARHGAP5-AS1Q96IT6 56 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 CITED2Q99967 270 aaPredicted RBP9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 HDHD3Q9BSH5 251 aaPredicted RBP9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 PECRQ9BY49 303 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 Q9N2K0 584 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 STUB1Q9UNE7 303 aa9.03□□□□□ -0.96
IGHV4-28-201ENST00000390612 IGHV3-72A0A0B4J1Y9 119 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 RAB27BO00194 218 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 IGHG2P01859 326 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 RAB6AP20340 208 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 MYL9P24844 172 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 HNF4GQ14541 408 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 MOGAT2Q3SYC2 334 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 ZNF833PQ6ZTB9 187 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 TGIF2LXQ8IUE1 241 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 Q8N9W7 124 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 OR5AU1Q8NGC0 362 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 FAM110DQ8TAY7 271 aaPredicted RBP9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 ZNF251Q9BRH9 671 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 AGMATQ9BSE5 352 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 ABHD14AQ9BUJ0 271 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 MGAT4AQ9UM21 535 aa9.02□□□□□ -0.97
IGHV4-28-201ENST00000390612 A0A0B4J203 849 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 RGS11O94810 467 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 MOSP00540 346 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 OPN1MWP04001 364 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 OPN1MW2P0DN77 364 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 OPN1MW3P0DN78 364 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 LSAMPQ13449 338 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 HES1Q14469 280 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 C10orf99Q6UWK7 81 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 CENPVQ7Z7K6 275 aaPredicted RBP9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 TPRA1Q86W33 373 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 LYG1Q8N1E2 194 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 NABP2Q9BQ15 211 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 TOLLIPQ9H0E2 274 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 ABCG5Q9H222 651 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 OR51E2Q9H255 320 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 IFI27L2Q9H2X8 130 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 C12orf4Q9NQ89 552 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 ABRACLQ9P1F3 81 aa9.01□□□□□ -0.97
IGHV4-28-201ENST00000390612 IGKV1-6A0A0C4DH72 117 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 LINC01548A6NM66 108 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 NOTOA8MTQ0 251 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 MFNGO00587 321 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 PROP1O75360 226 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 SCTP09683 121 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 SLC2A2P11168 524 aaPredicted RBP9□□□□□ -0.97
IGHV4-28-201ENST00000390612 OR3A3P47888 321 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 HLA-DRB3P79483 266 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 ARSJQ5FYB0 599 aaPredicted RBP9□□□□□ -0.97
IGHV4-28-201ENST00000390612 FAM71F2Q6NXP2 309 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 FAM71E2Q8N5Q1 922 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 OR8H1Q8NGG4 311 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 OR10R2Q8NGX6 335 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 RAB3CQ96E17 227 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 RBMXL1Q96E39 390 aaKnown RBP9□□□□□ -0.97
IGHV4-28-201ENST00000390612 S1PR3Q99500 378 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 CMSS1Q9BQ75 279 aaKnown RBP9□□□□□ -0.97
IGHV4-28-201ENST00000390612 PARP12Q9H0J9 701 aaKnown RBP9□□□□□ -0.97
IGHV4-28-201ENST00000390612 CHMP1AQ9HD42 196 aaPredicted RBP9□□□□□ -0.97
IGHV4-28-201ENST00000390612 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9□□□□□ -0.97
IGHV4-28-201ENST00000390612 LIN7CQ9NUP9 197 aaKnown RBP9□□□□□ -0.97
IGHV4-28-201ENST00000390612 SLC23A1Q9UHI7 598 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 SSR3Q9UNL2 185 aa9□□□□□ -0.97
IGHV4-28-201ENST00000390612 SAA2-SAA4A0A096LPE2 208 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 TRDCB7Z8K6 153 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 WIPF1O43516 503 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 PEX14O75381 377 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 SAA2P0DJI9 122 aaPredicted RBP8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 HIST1H1DP16402 221 aaKnown RBP8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 F2RL1P55085 397 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 SRSF7Q16629 238 aaKnown RBP eCLIP8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 NSUN5P1Q3KNT7 163 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 OR2AK2Q8NG84 335 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 IL1F10Q8WWZ1 152 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 MRPL20Q9BYC9 149 aaKnown RBP8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 C11orf54Q9H0W9 315 aaPredicted RBP8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 GHITMQ9H3K2 345 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 PIPOXQ9P0Z9 390 aa8.99□□□□□ -0.97
IGHV4-28-201ENST00000390612 TRIM64CA6NLI5 447 aa8.98□□□□□ -0.97
IGHV4-28-201ENST00000390612 SERPINE3A8MV23 424 aa8.98□□□□□ -0.97
IGHV4-28-201ENST00000390612 RAB29O14966 203 aa8.98□□□□□ -0.97
IGHV4-28-201ENST00000390612 ST8SIA5O15466 376 aa8.98□□□□□ -0.97
IGHV4-28-201ENST00000390612 KCNAB3O43448 404 aa8.98□□□□□ -0.97
IGHV4-28-201ENST00000390612 DIRAS3O95661 229 aa8.98□□□□□ -0.97
IGHV4-28-201ENST00000390612 CT45A6P0DMU7 189 aa8.98□□□□□ -0.97
IGHV4-28-201ENST00000390612 CT45A5P0DMU8 189 aa8.98□□□□□ -0.97
IGHV4-28-201ENST00000390612 CT45A7P0DMV0 189 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms