RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 CTRLP40313 264 aa16.26■□□□□ 0.19
SMARCD1-201ENST00000381513 TMEM234Q8WY98 164 aa16.26■□□□□ 0.19
SMARCD1-201ENST00000381513 BORCS8Q96FH0 119 aa16.26■□□□□ 0.19
SMARCD1-201ENST00000381513 TRAV30A0A087WSZ9 112 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 FAM166BA8MTA8 275 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 SYNGR2O43760 224 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 ZNF253O75346 499 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 DUSP3P51452 185 aaPredicted RBP16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 IGLV3-21P80748 117 aaPredicted RBP16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 MYBPHQ13203 477 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 IFI44Q8TCB0 444 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 IL19Q9UHD0 177 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 ERRFI1Q9UJM3 462 aaPredicted RBP16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 NOTCH4Q99466 2003 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 SNURFLB1AK76 121 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 NAPSAO96009 420 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 GLB1P16278 677 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 GRB2P62993 217 aaKnown RBP16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 OR2AE1Q8NHA4 323 aa16.25■□□□□ 0.19
SMARCD1-201ENST00000381513 HSPB6O14558 160 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 GPX1P07203 203 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 HOXB2P14652 356 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 PLPPR5Q32ZL2 321 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 KIAA1644Q3SXP7 199 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 FAM131CQ96AQ9 280 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 ZNF501Q96CX3 271 aaPredicted RBP16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 SFRP2Q96HF1 295 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 IGKV1D-13A0A0B4J2D9 117 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 CTXND1A0A1B0GTU2 59 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 DPRXA6NFQ7 191 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 MANSC4A6NHS7 340 aaPredicted RBP16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 VSTM2BA6NLU5 285 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 IGKV1-13P0DP09 117 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 NPPCP23582 126 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 EFNA3P52797 238 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 RPS16P62249 146 aaKnown RBP16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 DEFB103AP81534 67 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 FOXL1Q12952 345 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 ACSM6Q6P461 480 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 ZNF114Q8NC26 417 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 WNT16Q9UBV4 365 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 ZNF16P17020 682 aaPredicted RBP16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 UCP1P25874 307 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 ZNF542PQ5EBM4 170 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 ZDHHC23Q8IYP9 409 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 SVIPQ8NHG7 77 aa16.24■□□□□ 0.19
SMARCD1-201ENST00000381513 GTF3C1Q12789 2109 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 UNC80Q8N2C7 3258 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 TMEM150CB9EJG8 249 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 K7ERU9 68 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 CD99P14209 185 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 GABRA2P47869 451 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 SLC38A11Q08AI6 406 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 OSR2Q8N2R0 312 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 SGCZQ96LD1 299 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 UNC13CQ8NB66 2214 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 LOC102725191A0A1B0GVB3 256 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 ODAMA1E959 279 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 H3BMH7 237 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 HLA-DRB5Q30154 266 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 KCNE4Q8WWG9 221 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 LRFN3Q9BTN0 628 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 ZNF430Q9H8G1 570 aaPredicted RBP16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 RBFOX2O43251 390 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 YPEL3P61236 119 aaPredicted RBP16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 HAPLN4Q86UW8 402 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 TMEM204Q9BSN7 226 aa16.23■□□□□ 0.19
SMARCD1-201ENST00000381513 RANBP2P49792 3224 aaKnown RBP16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 LCN12Q6JVE5 192 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 C16orf47Q6ZP98 133 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 S100A7AQ86SG5 101 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 FAM19A2Q8N3H0 131 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 PNRC2Q9NPJ4 139 aaKnown RBP16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 CDH23Q9H251 3354 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 SLC17A3O00476 420 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 SCTP09683 121 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 EPHA8P29322 1005 aaPredicted RBP16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 ZNF295-AS1Q8N0V1 137 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 FAM58AQ8N1B3 248 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 OR10G8Q8NGN5 311 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 BORCS7Q96B45 105 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 MEGF9Q9H1U4 602 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 GNB4Q9HAV0 340 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 ESPL1Q14674 2120 aa16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 TDRD6O60522 2096 aaKnown RBP16.22■□□□□ 0.19
SMARCD1-201ENST00000381513 DIDO1Q9BTC0 2240 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 PDCD6O75340 191 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 CLDN1O95832 211 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 ATP5G3P48201 142 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 SNAI3Q3KNW1 292 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 Q6ZRM9 215 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 ADIPOR1Q96A54 375 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 DDIT4LQ96D03 193 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 F5P12259 2224 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 S100GP29377 79 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 Q5PR19 223 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 Q8N976 141 aa16.21■□□□□ 0.19
SMARCD1-201ENST00000381513 B4DGG1 531 aa16.21■□□□□ 0.18
SMARCD1-201ENST00000381513 FRMD6-AS1P0C7T7 363 aa16.21■□□□□ 0.18
SMARCD1-201ENST00000381513 C3orf79P0CE67 100 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms