RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SIAH2O43255 324 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 PDCD6O75340 191 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 TNFSF10P50591 281 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 RPL23P62829 140 aaKnown RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 SRPXP78539 464 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 TGFBR3Q03167 851 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 ENDOGQ14249 297 aaKnown RBP11.85□□□□□ -0.51
SDC1-202ENST00000381150 EXT1Q16394 746 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 RNF151Q2KHN1 245 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 OR10V1Q8NGI7 309 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 OXGR1Q96P68 337 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
SDC1-202ENST00000381150 AQP7O14520 342 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 NUPR1O60356 82 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 COX6A1P12074 109 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 CCL4P13236 92 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 RND2P52198 227 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 MEF2BQ02080 365 aaPredicted RBP11.84□□□□□ -0.51
SDC1-202ENST00000381150 IL24Q13007 206 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 KCNMB1Q16558 191 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 ZNF611Q8N823 705 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 IMMP2LQ96T52 175 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 AQP7P3A6NL99 342 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 PAGE4O60829 102 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 WDR1O75083 606 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 DTYMKP23919 212 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 ARL16Q0P5N6 197 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 DBX2Q6ZNG2 339 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 OR51G1Q8NGK1 321 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 OR2V1Q8NHB1 315 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 OR10J5Q8NHC4 309 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 ANGPTL4Q9BY76 406 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 SH2D2AQ9NP31 389 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
SDC1-202ENST00000381150 CCL2P13500 99 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 GPR146Q96CH1 333 aa11.84□□□□□ -0.51
SDC1-202ENST00000381150 ERRFI1Q9UJM3 462 aaPredicted RBP11.84□□□□□ -0.51
SDC1-202ENST00000381150 GYPAP02724 150 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 S100GP29377 79 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 GCH1P30793 250 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 RPP30P78346 268 aaKnown RBP11.83□□□□□ -0.52
SDC1-202ENST00000381150 EIF3IQ13347 325 aaKnown RBP11.83□□□□□ -0.52
SDC1-202ENST00000381150 LRTM2Q8N967 370 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 GUCD1Q96NT3 240 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 COL27A1Q8IZC6 1860 aaPredicted RBP11.83□□□□□ -0.52
SDC1-202ENST00000381150 DHHO43323 396 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 CFIP05156 583 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 PFN1P07737 140 aaKnown RBP11.83□□□□□ -0.52
SDC1-202ENST00000381150 KRTDAPP60985 99 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 BAXQ07812 192 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 ZNF468Q5VIY5 522 aaPredicted RBP11.83□□□□□ -0.52
SDC1-202ENST00000381150 ODF3L1Q8IXM7 274 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 ZNF709Q8N972 641 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 CTDSP1Q9GZU7 261 aa11.83□□□□□ -0.52
SDC1-202ENST00000381150 CA11O75493 328 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 HRASP01112 189 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 HIST1H3AP68431 136 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 RELQ04864 619 aaPredicted RBP11.82□□□□□ -0.52
SDC1-202ENST00000381150 KCNIP4Q6PIL6 250 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 BAGE3Q86Y29 109 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 BAGE2Q86Y30 109 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 C11orf42Q8N5U0 333 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 DSPP15924 2871 aaKnown RBP11.82□□□□□ -0.52
SDC1-202ENST00000381150 ZIC3O60481 467 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 TUSC2O75896 110 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 CCL3P10147 92 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
SDC1-202ENST00000381150 THBS3P49746 956 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.82□□□□□ -0.52
SDC1-202ENST00000381150 ZDHHC11Q9H8X9 412 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 ICE1Q9Y2F5 2266 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 SLC22A20A6NK97 555 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 B4E171 279 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 TP53I11O14683 189 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 CCL1P22362 96 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 TSPAN7P41732 249 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 PAX9P55771 341 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 MCEMP1Q8IX19 187 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 BTF3L4Q96K17 158 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 SIGLEC12Q96PQ1 595 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 HS3ST6Q96QI5 342 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 HSPB9Q9BQS6 159 aa11.82□□□□□ -0.52
SDC1-202ENST00000381150 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
SDC1-202ENST00000381150 SERPINA7P05543 415 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 OR10J1P30954 320 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 ID3Q02535 119 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 RSPO1Q2MKA7 263 aaPredicted RBP11.81□□□□□ -0.52
SDC1-202ENST00000381150 Q6ZPA2 131 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 Q6ZRM9 215 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 CMTM2Q8TAZ6 248 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 SPSB1Q96BD6 273 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 ZNF488Q96MN9 340 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 RIMS4Q9H426 269 aaPredicted RBP11.81□□□□□ -0.52
SDC1-202ENST00000381150 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 FOXJ2Q9P0K8 574 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 TAAR3PQ9P1P4 343 aa11.81□□□□□ -0.52
SDC1-202ENST00000381150 PTRH2Q9Y3E5 179 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms