RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 BCL2P10415 239 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 ERVK11-1P61568 191 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 PPP1CBP62140 327 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 ARL16Q0P5N6 197 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 WDR86Q86TI4 376 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 VASH2Q86V25 355 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 MDS2Q8NDY4 140 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 CDH20Q9HBT6 801 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 A0A1W2PNU3 283 aaPredicted RBP13.8□□□□□ -0.2
VPS16-203ENST00000380469 CXCL1P09341 107 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 SPANXN5Q5MJ07 72 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 DRAM1Q8N682 238 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 WDYHV1Q96HA8 205 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 FER1L6-AS2Q96M78 137 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 OR2J1Q9GZK6 312 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 OR51M1Q9H341 326 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 WIPI2Q9Y4P8 454 aa13.8□□□□□ -0.2
VPS16-203ENST00000380469 CDIPTO14735 213 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 PGA5P0DJD9 388 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 HOXA5P20719 270 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 S100PP25815 95 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
VPS16-203ENST00000380469 ZNF146Q15072 292 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 ZNF610Q8N9Z0 462 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 PINX1Q96BK5 328 aaKnown RBP13.79□□□□□ -0.2
VPS16-203ENST00000380469 VSIRQ9H7M9 311 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 MBNL3Q9NUK0 354 aaKnown RBP13.79□□□□□ -0.2
VPS16-203ENST00000380469 KCNIP1Q9NZI2 227 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 AHCTF1Q8WYP5 2266 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 SMPD2O60906 423 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 NDUFA6P56556 154 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 ERVFRD-1P60508 538 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 UBE2NP61088 152 aaKnown RBP13.79□□□□□ -0.2
VPS16-203ENST00000380469 ACSF3Q4G176 576 aaPredicted RBP13.79□□□□□ -0.2
VPS16-203ENST00000380469 TMEM41BQ5BJD5 291 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 FIP1L1Q6UN15 594 aaKnown RBP13.79□□□□□ -0.2
VPS16-203ENST00000380469 HAPLN4Q86UW8 402 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 FGFRL1Q8N441 504 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 TOLLIPQ9H0E2 274 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 ZNF665Q9H7R5 613 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 IL17BQ9UHF5 180 aa13.79□□□□□ -0.2
VPS16-203ENST00000380469 TGIF2-C20orf24A0A0A6YYL0 155 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 TRGV5A0A0B4J1U4 118 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 CYB5BO43169 146 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 PPIHO43447 177 aaKnown RBP13.78□□□□□ -0.2
VPS16-203ENST00000380469 IFNA1P01562 189 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 ZNF726P1Q15940 193 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 RCC1LQ96I51 464 aaKnown RBP13.78□□□□□ -0.2
VPS16-203ENST00000380469 P2RX4Q99571 388 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 PARD6GQ9BYG4 376 aaPredicted RBP13.78□□□□□ -0.2
VPS16-203ENST00000380469 WDR61Q9GZS3 305 aaKnown RBP13.78□□□□□ -0.2
VPS16-203ENST00000380469 DOCK7Q96N67 2140 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 LINC00587B1AMM8 73 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 ATXN7O15265 892 aaPredicted RBP13.78□□□□□ -0.2
VPS16-203ENST00000380469 YIF1AO95070 293 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 GRPP07492 148 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 CELA3BP08861 270 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 FGF8P55075 233 aaPredicted RBP13.78□□□□□ -0.2
VPS16-203ENST00000380469 FAM90A2PQ658T7 463 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 OR4C12Q96R67 309 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 MIOXQ9UGB7 285 aa13.78□□□□□ -0.2
VPS16-203ENST00000380469 RAC2P15153 192 aa13.77□□□□□ -0.21
VPS16-203ENST00000380469 CDX1P47902 265 aaPredicted RBP13.77□□□□□ -0.21
VPS16-203ENST00000380469 IDH3GP51553 393 aaPredicted RBP13.77□□□□□ -0.21
VPS16-203ENST00000380469 TGFBR3Q03167 851 aa13.77□□□□□ -0.21
VPS16-203ENST00000380469 MRGPRGQ86SM5 289 aa13.77□□□□□ -0.21
VPS16-203ENST00000380469 VAX2Q9UIW0 290 aa13.77□□□□□ -0.21
VPS16-203ENST00000380469 LNP1A1A4G5 178 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 SLC38A11Q08AI6 406 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 MSMO1Q15800 293 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 GABRA6Q16445 453 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
VPS16-203ENST00000380469 ZNF645Q8N7E2 425 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 ZBTB34Q8NCN2 500 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 SLC25A40Q8TBP6 338 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 TAF15Q92804 592 aaKnown RBP eCLIP13.76□□□□□ -0.21
VPS16-203ENST00000380469 GALMQ96C23 342 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 GUCD1Q96NT3 240 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 TMEM242Q9NWH2 141 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 SPRR3Q9UBC9 169 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 MED12LQ86YW9 2145 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 IGHV3-64DA0A0J9YX35 117 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 TMEM30CPA0ZSE6 113 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 TMEM210A6NLX4 147 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 CLDN1O95832 211 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 HAND1O96004 215 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 SELEP16581 610 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 ERVS71-1P61550 626 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 TNFRSF9Q07011 255 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 CA5BP1Q8WTZ4 195 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 RBKSQ9H477 322 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 SLC39A9Q9NUM3 307 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 DOK5Q9P104 306 aa13.76□□□□□ -0.21
VPS16-203ENST00000380469 COLQQ9Y215 455 aaPredicted RBP13.76□□□□□ -0.21
VPS16-203ENST00000380469 UBE2L5PA0A1B0GUS4 154 aa13.75□□□□□ -0.21
VPS16-203ENST00000380469 MAP1LC3B2A6NCE7 125 aa13.75□□□□□ -0.21
VPS16-203ENST00000380469 CEBPZOSA8MTT3 80 aa13.75□□□□□ -0.21
VPS16-203ENST00000380469 CYB5R3P00387 301 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms