RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ZNF320A2RRD8 509 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 IGFBP3P17936 291 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-203ENST00000378169 C1orf185Q5T7R7 199 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 BTNL8Q6UX41 500 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF561Q8N587 486 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 ATRXP46100 2492 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 FOXG1P55316 489 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-203ENST00000378169 GABRA6Q16445 453 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF665Q9H7R5 613 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 CRYM-AS1A6NIL9 109 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 MPTX1A8MV57 137 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 CCL21O00585 134 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 WNT9BO14905 357 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 SPINK4O60575 86 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 CD200P41217 278 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 TNFSF10P50591 281 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 LAMTOR1Q6IAA8 161 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 RSG1Q9BU20 258 aa11.32□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF331Q9NQX6 463 aaPredicted RBP11.32□□□□□ -0.6
NPHP4-203ENST00000378169 A0A1B0GU03 582 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 LOC390937A0A1W2PQ73 354 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-203ENST00000378169 CHRNA7P36544 502 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 OR8G5Q8NG78 346 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 GYPAP02724 150 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 FGF2P09038 288 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF708P17019 499 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF439Q8NDP4 499 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 TMEM37Q8WXS4 190 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 BSCL2Q96G97 398 aaPredicted RBP11.31□□□□□ -0.6
NPHP4-203ENST00000378169 MS4A5Q9H3V2 200 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 SLC2A8Q9NY64 477 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 RAB4AP20338 218 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 MPV17P39210 176 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 BPIFB3P59826 476 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 FABP9Q0Z7S8 132 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 CSRP2Q16527 193 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 BTF3L4Q96K17 158 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 CACFD1Q9UGQ2 172 aa11.31□□□□□ -0.6
NPHP4-203ENST00000378169 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
NPHP4-203ENST00000378169 DEDDO75618 318 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 NEURL1O76050 574 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 RBP4P02753 201 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 ID4P47928 161 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 GLIPR1P48060 266 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 KCNMB1Q16558 191 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 LINC00596Q86U02 117 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 FGFBP3Q8TAT2 258 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 HSD17B10Q99714 261 aaKnown RBP11.3□□□□□ -0.6
NPHP4-203ENST00000378169 MSGN1A6NI15 193 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 H0Y8G0 127 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 MGST3O14880 152 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 COX5BP10606 129 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 HARBI1Q96MB7 349 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 PLXND1Q9Y4D7 1925 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 WISP1O95388 367 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 CELA3BP08861 270 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 ERVFC1-1P60608 527 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 SNRPEP62304 92 aaKnown RBP11.3□□□□□ -0.6
NPHP4-203ENST00000378169 GUCA2BQ16661 112 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 DBX2Q6ZNG2 339 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 Q6ZT83 130 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 PAQR4Q8N4S7 273 aaPredicted RBP11.3□□□□□ -0.6
NPHP4-203ENST00000378169 FABP1P07148 127 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 MELTFP08582 738 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 SNRPCP09234 159 aaKnown RBP11.3□□□□□ -0.6
NPHP4-203ENST00000378169 HLA-GP17693 338 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 RHOVQ96L33 236 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
NPHP4-203ENST00000378169 PIPOXQ9P0Z9 390 aa11.3□□□□□ -0.6
NPHP4-203ENST00000378169 IGLV3-32A0A0A0MS00 114 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 LRRC3CA6NJW4 275 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 CLDN34H7C241 214 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 CLEC3BP05452 202 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 NTF3P20783 257 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 TMEM241Q24JQ0 296 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 TGIF2LYQ8IUE0 185 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 TGIF2LXQ8IUE1 241 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 C12orf57Q99622 126 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 LINC00470Q9BZP3 86 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 AURKAIP1Q9NWT8 199 aaPredicted RBP11.29□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF716A6NP11 495 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 G3V3Q6 166 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
NPHP4-203ENST00000378169 ORM2P19652 201 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 LHX2P50458 406 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 NAAAQ02083 359 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 TNXAQ16473 311 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 FGFRL1Q8N441 504 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 OR5B3Q8NH48 314 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 TP53RKQ96S44 253 aa11.29□□□□□ -0.6
NPHP4-203ENST00000378169 PKIBQ9C010 78 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms