RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 ADIPOR1Q96A54 375 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 SOSTQ9BQB4 213 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 OR51M1Q9H341 326 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 GNB4Q9HAV0 340 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 OR1A1Q9P1Q5 309 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 NPTNQ9Y639 398 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 A0A0J9YW62 118 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 A8MXK9 166 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 MS4A18H0YCH9 400 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 SPINK4O60575 86 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 LYZL6O75951 148 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 PSG2P11465 335 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 SUCLG1P53597 346 aaKnown RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 RPL11P62913 178 aaKnown RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 MS4A18Q3C1V0 323 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 ANKRD55Q3KP44 614 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 C5orf66Q9H5L9 145 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 TCAPO15273 167 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 HTR1DP28221 377 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 ZNF83P51522 516 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 UCP3P55916 312 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 B2MP61769 119 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 GABRA6Q16445 453 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 CEACAM21Q3KPI0 293 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 RIPPLY2Q5TAB7 128 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 INO80CQ6PI98 192 aaPredicted RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 C1orf174Q8IYL3 243 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 TMEM105Q8N8V8 129 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 NFAM1Q8NET5 270 aaPredicted RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 DUSP15Q9H1R2 295 aaPredicted RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 G6PC2Q9NQR9 355 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 PLXNB3Q9ULL4 1909 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 A0A0B4J293 547 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 HELTA6NFD8 242 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 C21orf140B9A014 251 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 FAM90A26D6RGX4 464 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 IGHMP01871 453 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 THY1P04216 161 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 ZP1P60852 638 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 PAFAH1B2P68402 229 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 TNFAIP6P98066 277 aaPredicted RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 MEF2BQ02080 365 aaPredicted RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 SIGLEC14Q08ET2 396 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 EIF4E3Q8N5X7 224 aaKnown RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 OR10AD1Q8NGE0 317 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 GSX1Q9H4S2 264 aaPredicted RBP7.28□□□□□ -1.24
VPS36-201ENST00000378060 LHFPL6Q9Y693 200 aa7.28□□□□□ -1.24
VPS36-201ENST00000378060 IGHV5-10-1A0A0J9YXX1 117 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 MELTFP08582 738 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 DANCRP0C864 163 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 NPY1RP25929 384 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 GNG10P50151 68 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 PSG5Q15238 335 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 TEPPQ6URK8 271 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 TMEM108Q6UXF1 575 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 PDPNQ86YL7 162 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 OR4P4Q8NGL7 312 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 ABHD3Q8WU67 409 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 THYN1Q9P016 225 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 CBY3A6NI87 242 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 MT-ND6P03923 174 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 BMP5P22003 454 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 MPLP40238 635 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 PRRX1P54821 245 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 RPS11P62280 158 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS36-201ENST00000378060 Q6ZN92 141 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 CT55Q8WUE5 264 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 CHRNA10Q9GZZ6 450 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 PLXNA2O75051 1894 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 A0A1W2PR80 420 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 PQLC2LA1A4F0 135 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 M0R296 226 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 KCNAB3O43448 404 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 GCGP01275 180 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 SRP14P37108 136 aaKnown RBP7.27□□□□□ -1.25
VPS36-201ENST00000378060 PSG4Q00888 419 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 RUNX1Q01196 453 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 NHLH1Q02575 133 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 HIST3H3Q16695 136 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 SPINK9Q5DT21 86 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 FBXW9Q5XUX1 488 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 SPINK14Q6IE38 97 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 APCDD1LQ8NCL9 501 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 RPEQ96AT9 228 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 CARHSP1Q9Y2V2 147 aaKnown RBP7.27□□□□□ -1.25
VPS36-201ENST00000378060 DCHS1Q96JQ0 3298 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 FREM2Q5SZK8 3169 aa7.27□□□□□ -1.25
VPS36-201ENST00000378060 TRAV38-1A0A0B4J264 116 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 NPIPB9F8W1W9 429 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 RBP4P02753 201 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 CAMPP49913 170 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SFTPA2Q8IWL1 248 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 POC1AQ8NBT0 407 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 STARD4Q96DR4 205 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 MISP3Q96FF7 219 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 TINAGQ9UJW2 476 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 NEUROG3Q9Y4Z2 214 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SEMA7AO75326 666 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 C1QL1O75973 258 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms