RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 RAB3BP20337 219 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 CD1BP29016 333 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 HTD2P86397 168 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 PLA2G7Q13093 441 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 UBE2UQ5VVX9 321 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 C10orf99Q6UWK7 81 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 MOB1BQ7L9L4 216 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 SLC35E3Q7Z769 313 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 IZUMO1Q8IYV9 350 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 OR56B1Q8NGI3 324 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 FCGR1BQ92637 280 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 ST6GALNAC6Q969X2 333 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 RASL11BQ9BPW5 248 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 CMSS1Q9BQ75 279 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 PECRQ9BY49 303 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 RIMS4Q9H426 269 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 SLC23A1Q9UHI7 598 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 LRRC42Q9Y546 428 aa9.19□□□□□ -0.94
SMARCE1-203ENST00000377808 A0A0B4J203 849 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 TRAV1-2A0A0B4J238 106 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 SHISA3A0PJX4 238 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 YPEL1O60688 119 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 NAPSAO96009 420 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 HLA-DRB3P79483 266 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 STEAP3Q658P3 488 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 FOXRED2Q8IWF2 684 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 WIPF2Q8TF74 440 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 NOL4LQ96MY1 436 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 YPEL2Q96QA6 119 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 MRPL20Q9BYC9 149 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 YTHDF1Q9BYJ9 559 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 C12orf4Q9NQ89 552 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 RAB22AQ9UL26 194 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 STUB1Q9UNE7 303 aa9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 TSSC4Q9Y5U2 329 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-203ENST00000377808 PKD1L1Q8TDX9 2849 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 SAA2-SAA4A0A096LPE2 208 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 IFITM5A6NNB3 132 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 LANCL1O43813 399 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 PF4P02776 101 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 CD3GP09693 182 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 SAA2P0DJI9 122 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 GADD45AP24522 165 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 OR3A3P47888 321 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF137PP52743 207 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 LSAMPQ13449 338 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 NEDD8Q15843 81 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF773Q6PK81 442 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 CD200R1LQ6Q8B3 271 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 Q6ZPA2 131 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 FAM89BQ8N5H3 189 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 HSF4Q9ULV5 492 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 MGAT4AQ9UM21 535 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 SSR3Q9UNL2 185 aa9.17□□□□□ -0.94
SMARCE1-203ENST00000377808 LOC100506127A0A0U1RQW1 187 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 G3V4G9 280 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 LDLRAD4O15165 306 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 SCTP09683 121 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 SLC2A2P11168 524 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 GNB3P16520 340 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 ZBTB25P24278 435 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 CEACAM6P40199 344 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 GPR12P47775 334 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 TMEM50BP56557 158 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 SLC35B1P78383 322 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 CD83Q01151 205 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 EBI3Q14213 229 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 MMDQ15546 238 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 MOGAT2Q3SYC2 334 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 PLAC9Q5JTB6 97 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF880Q6PDB4 577 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 Q8N6K4 173 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 Q8N9W7 124 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 CHPT1Q8WUD6 406 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 S1PR3Q99500 378 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 IFI27L2Q9H2X8 130 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 Q9N2K0 584 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 LIN7CQ9NUP9 197 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 TXNL4BQ9NX01 149 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 OR1A1Q9P1Q5 309 aa9.16□□□□□ -0.94
SMARCE1-203ENST00000377808 TRBV6-6A0A0A6YYG2 114 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 METTL21EPA6NDL7 271 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 LINC01548A6NM66 108 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 FOXI3A8MTJ6 420 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 NUDT19A8MXV4 375 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 RAB29O14966 203 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 CD33P20138 364 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 GALP22466 123 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 TALDO1P37837 337 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 F2RL1P55085 397 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 MXD1Q05195 221 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 ARFRP1Q13795 201 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 RPL39P5Q59GN2 51 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 ZNF833PQ6ZTB9 187 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 ODF3L1Q8IXM7 274 aa9.15□□□□□ -0.94
SMARCE1-203ENST00000377808 STPG2Q8N412 459 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms