RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 MRPL48Q96GC5 212 aaKnown RBP7.41□□□□□ -1.22
C9orf85-202ENST00000377027 MCRIP2Q9BUT9 160 aaKnown RBP7.41□□□□□ -1.22
C9orf85-202ENST00000377027 KLK15Q9H2R5 256 aa7.41□□□□□ -1.22
C9orf85-202ENST00000377027 ZNF107Q9UII5 783 aaPredicted RBP7.41□□□□□ -1.22
C9orf85-202ENST00000377027 RPL36Q9Y3U8 105 aaKnown RBP7.41□□□□□ -1.22
C9orf85-202ENST00000377027 A0A1W2PPK0 400 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 SNTNA6NMZ2 147 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 G3V318 75 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 I3L521 148 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 MPZL2O60487 215 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 MOSP00540 346 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 HBZP02008 142 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 IGF1P05019 195 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 RAB25P57735 213 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 GNB1P62873 340 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 SLC35B1P78383 322 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 RIPK1Q13546 671 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 Q3ZCU0 254 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 C19orf54Q5BKX5 351 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 C6orf141Q5SZD1 244 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 SYT6Q5T7P8 510 aaPredicted RBP7.4□□□□□ -1.22
C9orf85-202ENST00000377027 PQLC1Q8N2U9 271 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 OR8U1Q8NH10 309 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 C4orf3Q8WVX3 66 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 DPF1Q92782 380 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 GHSRQ92847 366 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 MUL1Q969V5 352 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 CPNE2Q96FN4 548 aaPredicted RBP7.4□□□□□ -1.22
C9orf85-202ENST00000377027 KCTD7Q96MP8 289 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 Q96MT0 163 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 RDH12Q96NR8 316 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 OR14A2Q96R54 314 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 C9orf16Q9BUW7 83 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 GPR61Q9BZJ8 451 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 BANF2Q9H503 90 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 S100A14Q9HCY8 104 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 ZNF580Q9UK33 172 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 DIMT1Q9UNQ2 313 aaKnown RBP7.4□□□□□ -1.22
C9orf85-202ENST00000377027 FBXO7Q9Y3I1 522 aa7.4□□□□□ -1.22
C9orf85-202ENST00000377027 SORL1Q92673 2214 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 MAGEB3O15480 346 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 SOX15O60248 233 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 CD2P06729 351 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 ELANEP08246 267 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 SLC2A2P11168 524 aaPredicted RBP7.39□□□□□ -1.23
C9orf85-202ENST00000377027 GTF2F2P13984 249 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 MYF6P23409 242 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 INSL4Q14641 139 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 MORN2Q502X0 79 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 GLIPR1L1Q6UWM5 242 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 OR52L2PQ8NGH6 319 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 MRPL30Q8TCC3 161 aaKnown RBP7.39□□□□□ -1.23
C9orf85-202ENST00000377027 ASCL2Q99929 193 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 ZMAT4Q9H898 229 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.39□□□□□ -1.23
C9orf85-202ENST00000377027 BABAM2Q9NXR7 383 aa7.39□□□□□ -1.23
C9orf85-202ENST00000377027 MRPS28Q9Y2Q9 187 aaKnown RBP7.39□□□□□ -1.23
C9orf85-202ENST00000377027 IGHV7-81A0A0B4J1V7 117 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 SEC14L6B5MCN3 397 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 ATP6V0E1O15342 81 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 LANCL1O43813 399 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 CSTBP04080 98 aaKnown RBP7.38□□□□□ -1.23
C9orf85-202ENST00000377027 DCKP27707 260 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 SOX6P35712 828 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 PPP1CCP36873 323 aaKnown RBP7.38□□□□□ -1.23
C9orf85-202ENST00000377027 PPP3R1P63098 170 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 Q499Y3 187 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 CXorf66Q5JRM2 361 aaPredicted RBP7.38□□□□□ -1.23
C9orf85-202ENST00000377027 C9orf66Q5T8R8 295 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 RAB12Q6IQ22 244 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 PRR18Q8N4B5 295 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 ZNF491Q8N8L2 437 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 OR11H1Q8NG94 326 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 OR5M8Q8NGP6 311 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 NEK7Q8TDX7 302 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 DERL3Q96Q80 235 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 NABP2Q9BQ15 211 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 ZNF251Q9BRH9 671 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 MRPL20Q9BYC9 149 aaKnown RBP7.38□□□□□ -1.23
C9orf85-202ENST00000377027 PARP12Q9H0J9 701 aaKnown RBP7.38□□□□□ -1.23
C9orf85-202ENST00000377027 ALX4Q9H161 411 aaPredicted RBP7.38□□□□□ -1.23
C9orf85-202ENST00000377027 KCNK15Q9H427 330 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 TAF9BQ9HBM6 251 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 SMPD3Q9NY59 655 aaPredicted RBP7.38□□□□□ -1.23
C9orf85-202ENST00000377027 ETAA1Q9NY74 926 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 U3KQK5 164 aa7.38□□□□□ -1.23
C9orf85-202ENST00000377027 PNMA8CA0A1B0GUJ8 204 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 UBE2QL1A1L167 161 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 FAM90A10PA6NDY2 464 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 RAMP3O60896 148 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 ZNF780AO75290 641 aaPredicted RBP7.37□□□□□ -1.23
C9orf85-202ENST00000377027 HLA-DRB1P01911 266 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 MAS1P04201 325 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 GNAO1P09471 354 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 MGMTP16455 207 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 BLVRBP30043 206 aaPredicted RBP7.37□□□□□ -1.23
C9orf85-202ENST00000377027 OR3A3P47888 321 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 ACTBP60709 375 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 ZNF260Q3ZCT1 412 aa7.37□□□□□ -1.23
C9orf85-202ENST00000377027 YIF1BQ5BJH7 314 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms