RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 NDUFB7P17568 137 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ANXA7P20073 488 aaKnown RBP8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 FPR2P25090 351 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 EDDM3BP56851 147 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 LCN2P80188 198 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SURF2Q15527 256 aaPredicted RBP8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 LRRC10Q5BKY1 277 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 AADACL3Q5VUY0 350 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 METTL11BQ5VVY1 283 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX4L9Q6RFH8 374 aaPredicted RBP8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TPRX1Q8N7U7 411 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SIGLECL1Q8N7X8 197 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR13A1Q8NGR1 328 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZFAND1Q8TCF1 268 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MRGPRDQ8TDS7 321 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ARL11Q969Q4 196 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MRGPRFQ96AM1 343 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 KIRREL1Q96J84 757 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CABLES2Q9BTV7 478 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 BEX1Q9HBH7 125 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GPN1Q9HCN4 374 aaPredicted RBP8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 RAB9BQ9NP90 201 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX4Q9UBX2 424 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SLC25A10Q9UBX3 287 aaPredicted RBP8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 VSIG4Q9Y279 399 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ALG5Q9Y673 324 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TRGV10A0A0A0MS01 117 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 A0A0B4J293 547 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 hADV38S2A0JD32 116 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 NPIPB11E5RHQ5 1161 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HSPA12AO43301 675 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 PFDN1O60925 122 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZNF728P0DKX0 622 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 PGAM2P15259 253 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 AADACP22760 399 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 NFYAP23511 347 aaPredicted RBP8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CEACAM6P40199 344 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 UCP3P55916 312 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HERV-K104P61576 105 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MEF2CQ06413 473 aaPredicted RBP8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 FOXL1Q12952 345 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HERPUD1Q15011 391 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TMEM155Q4W5P6 130 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 LPCAT3Q6P1A2 487 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GLDNQ6ZMI3 551 aaPredicted RBP8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TMED4Q7Z7H5 227 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SLC25A42Q86VD7 318 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 PRR18Q8N4B5 295 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR1L1Q8NH94 360 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 IL1F10Q8WWZ1 152 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TAF15Q92804 592 aaKnown RBP eCLIP8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CORO2AQ92828 525 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DACT3Q96B18 629 aaPredicted RBP8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MOB3AQ96BX8 217 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GALMQ96C23 342 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DCTN5Q9BTE1 182 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GHITMQ9H3K2 345 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MIOXQ9UGB7 285 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SLC23A1Q9UHI7 598 aa8.98□□□□□ -0.97
HLA-DQA1-202ENST00000374949 C7orf66A4D0T2 115 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HMX3A6NHT5 357 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SNRPGP15A8MWD9 76 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DVL1O14640 695 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GPR37O15354 613 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TUSC2O75896 110 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 PPYP01298 95 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HBZP02008 142 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CTSDP07339 412 aaPredicted RBP8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR4E1P0C645 316 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CGB3P0DN86 165 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CGB7P0DN87 165 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 VSIG10L2P0DP72 767 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZBTB25P24278 435 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TAS2R31P59538 309 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HTD2P86397 168 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MIDNQ504T8 468 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 RBMS3Q6XE24 437 aaKnown RBP8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 H1FOOQ8IZA3 346 aaPredicted RBP8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CHAC2Q8WUX2 184 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 RTBDNQ9BSG5 229 aaPredicted RBP8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR51J1Q9H342 316 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 UNKLQ9H9P5 680 aaKnown RBP8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZNF69Q9UC07 566 aa8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 C14orf166Q9Y224 244 aaKnown RBP8.97□□□□□ -0.97
HLA-DQA1-202ENST00000374949 KBTBD11-OT1A0A1B0GTJ5 212 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZNF729A6NN14 1252 aaPredicted RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C15orf65H3BRN8 121 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 WNT2P09544 360 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 AKR1C4P17516 323 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 GATA3P23771 443 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 PRTN3P24158 256 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 ZFP36P26651 326 aaKnown RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 FXYD4P59646 89 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 UBE2MP61081 183 aaKnown RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 RPL31P62899 125 aaKnown RBP8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 CBX3Q13185 183 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 C4orf46Q504U0 113 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 NLRC3Q7RTR2 1065 aa8.96□□□□□ -0.98
HLA-DQA1-202ENST00000374949 SLC38A6Q8IZM9 456 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms