RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 BEST4Q8NFU0 473 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 OR10V1Q8NGI7 309 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 CT45A3Q8NHU0 189 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 MAFIPQ8WZ33 124 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 JMJD8Q96S16 334 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 SOSTQ9BQB4 213 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 ZNRD1Q9P1U0 126 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 SLC23A1Q9UHI7 598 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 ANXA10Q9UJ72 324 aa9.2□□□□□ -0.94
HSPG2-202ENST00000374676 MDFIC2A0A1B0GVS7 189 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 A0A1W2PPE3 182 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 VGLL3A8MV65 326 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 HSPA12AO43301 675 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 LPLP06858 475 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 IL3RAP26951 378 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 S100A5P33763 92 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 IER3P46695 156 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 GNG10P50151 68 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 RIPPLY3P57055 190 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 MRPS10P82664 201 aaKnown RBP9.19□□□□□ -0.94
HSPG2-202ENST00000374676 MADCAM1Q13477 382 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 SSX2Q16385 188 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 IGSF11Q5DX21 431 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 PYHIN1Q6K0P9 492 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 SNX29P2Q8IUI4 249 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 DYNAPQ8N1N2 210 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 TMEM86BQ8N661 226 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 GVQW1Q8N7I0 195 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 OR2AK2Q8NG84 335 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 OR10X1Q8NGY0 326 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 OR10J5Q8NHC4 309 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 EDARADDQ8WWZ3 215 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 ABHD1Q96SE0 405 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 GHITMQ9H3K2 345 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 OR1A1Q9P1Q5 309 aa9.19□□□□□ -0.94
HSPG2-202ENST00000374676 CLDN34H7C241 214 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 BET1O15155 118 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 CTDSPLO15194 276 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 SLC31A2O15432 143 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 RAB7AP51149 207 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 DYNLT3P51808 116 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 ZNF137PP52743 207 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 BAMBIQ13145 260 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 TPTE2P1Q5T6R2 138 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 CCDC144NLQ6NUI1 221 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 PRIMA1Q86XR5 153 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 ZDHHC22Q8N966 263 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 OR6Q1Q8NGQ2 317 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 OR5R1Q8NH85 324 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 FAM216AQ8WUB2 273 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 SSMEM1Q8WWF3 244 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 GCDHQ92947 438 aaPredicted RBP9.18□□□□□ -0.94
HSPG2-202ENST00000374676 ST6GALNAC6Q969X2 333 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 ABHD14AQ9BUJ0 271 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 C11orf54Q9H0W9 315 aaPredicted RBP9.18□□□□□ -0.94
HSPG2-202ENST00000374676 DPAGT1Q9H3H5 408 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 IFT46Q9NQC8 304 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 RDH8Q9NYR8 311 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 HILPDAQ9Y5L2 63 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 POMT1Q9Y6A1 747 aa9.18□□□□□ -0.94
HSPG2-202ENST00000374676 MEIS3P1A6NDR6 274 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 FABP12A6NFH5 140 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 GABARAPH6UMI1 98 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 VENTXO95231 258 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 GAPDHP04406 335 aaKnown RBP9.17□□□□□ -0.94
HSPG2-202ENST00000374676 PTBP1P26599 531 aaKnown RBP eCLIP9.17□□□□□ -0.94
HSPG2-202ENST00000374676 ETV6P41212 452 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 SSBP1Q04837 148 aaKnown RBP9.17□□□□□ -0.94
HSPG2-202ENST00000374676 ZNF816Q0VGE8 651 aaPredicted RBP9.17□□□□□ -0.94
HSPG2-202ENST00000374676 IL18Q14116 193 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 SLC9A3R2Q15599 337 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 LRRC75BQ2VPJ9 315 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 CCDC190Q86UF4 302 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 LYSMD2Q8IV50 215 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 H1FOOQ8IZA3 346 aaPredicted RBP9.17□□□□□ -0.94
HSPG2-202ENST00000374676 OR5AP2Q8NGF4 316 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 OR52I2Q8NH67 350 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 PIFOQ8TCI5 191 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 SNAPC3Q92966 411 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 RPEQ96AT9 228 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 SSX3Q99909 188 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 GINS4Q9BRT9 223 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 PARP12Q9H0J9 701 aaKnown RBP9.17□□□□□ -0.94
HSPG2-202ENST00000374676 IFI27L2Q9H2X8 130 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 ESM1Q9NQ30 184 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 MTFP1Q9UDX5 166 aa9.17□□□□□ -0.94
HSPG2-202ENST00000374676 DNAJC9-AS1A6NH13 148 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 HOXA3O43365 443 aaPredicted RBP9.16□□□□□ -0.94
HSPG2-202ENST00000374676 LANCL1O43813 399 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 RBBP9O75884 186 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 TUSC2O75896 110 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 IGHV4-59P01825 116 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 PAX6P26367 422 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 BRS3P32247 399 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 RCVRNP35243 200 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 ARHGDIBP52566 201 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 ARPC4P59998 168 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 CDK10Q15131 360 aa9.16□□□□□ -0.94
HSPG2-202ENST00000374676 CNPY1Q3B7I2 92 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms