RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 GALMQ96C23 342 aa16.28■□□□□ 0.2
SMNDC1-201ENST00000369592 ARHGAP5-AS1Q96IT6 56 aa16.28■□□□□ 0.2
SMNDC1-201ENST00000369592 HDHD3Q9BSH5 251 aaPredicted RBP16.28■□□□□ 0.2
SMNDC1-201ENST00000369592 PECRQ9BY49 303 aa16.28■□□□□ 0.2
SMNDC1-201ENST00000369592 RAB22AQ9UL26 194 aa16.28■□□□□ 0.2
SMNDC1-201ENST00000369592 KCNK7Q9Y2U2 307 aa16.28■□□□□ 0.2
SMNDC1-201ENST00000369592 IGHV3-72A0A0B4J1Y9 119 aa16.27■□□□□ 0.2
SMNDC1-201ENST00000369592 VEGFCP49767 419 aa16.27■□□□□ 0.2
SMNDC1-201ENST00000369592 HNF4GQ14541 408 aa16.27■□□□□ 0.2
SMNDC1-201ENST00000369592 KCTD21Q4G0X4 260 aa16.27■□□□□ 0.2
SMNDC1-201ENST00000369592 OR5AU1Q8NGC0 362 aa16.27■□□□□ 0.2
SMNDC1-201ENST00000369592 FAM110DQ8TAY7 271 aaPredicted RBP16.27■□□□□ 0.2
SMNDC1-201ENST00000369592 ABHD14AQ9BUJ0 271 aa16.27■□□□□ 0.2
SMNDC1-201ENST00000369592 TXNL4BQ9NX01 149 aaKnown RBP16.27■□□□□ 0.2
SMNDC1-201ENST00000369592 PRKDCP78527 4128 aaKnown RBP16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 RAB3BP20337 219 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 PSMB9P28065 219 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 HES1Q14469 280 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 TGIF2LXQ8IUE1 241 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 Q8N9W7 124 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 OR56B1Q8NGI3 324 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 OR2T10Q8NGZ9 312 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 IFI27L2Q9H2X8 130 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 Q9N2K0 584 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 STUB1Q9UNE7 303 aa16.26■□□□□ 0.19
SMNDC1-201ENST00000369592 RAB27BO00194 218 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 ITGB1BP1O14713 200 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 IGHG2P01859 326 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 OPN1MWP04001 364 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 OPN1MW2P0DN77 364 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 OPN1MW3P0DN78 364 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 RAB6AP20340 208 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 MYL9P24844 172 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 LSAMPQ13449 338 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 MOGAT2Q3SYC2 334 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 C10orf99Q6UWK7 81 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 ZNF833PQ6ZTB9 187 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 LYG1Q8N1E2 194 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 PTX4Q96A99 478 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 ZNF251Q9BRH9 671 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 AGMATQ9BSE5 352 aa16.25■□□□□ 0.19
SMNDC1-201ENST00000369592 A0A0B4J203 849 aa16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 RGS11O94810 467 aa16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 MOSP00540 346 aa16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 ARSJQ5FYB0 599 aaPredicted RBP16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 RBMXL1Q96E39 390 aaKnown RBP16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 PARP12Q9H0J9 701 aaKnown RBP16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 C12orf4Q9NQ89 552 aa16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 ABRACLQ9P1F3 81 aa16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 MGAT4AQ9UM21 535 aa16.24■□□□□ 0.19
SMNDC1-201ENST00000369592 IGKV1-6A0A0C4DH72 117 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 MFNGO00587 321 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 PEX14O75381 377 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 HLA-DRB3P79483 266 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 CENPVQ7Z7K6 275 aaPredicted RBP16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 FAM71E2Q8N5Q1 922 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 OR8H1Q8NGG4 311 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 NABP2Q9BQ15 211 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 TOLLIPQ9H0E2 274 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 ABCG5Q9H222 651 aa16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 CHMP1AQ9HD42 196 aaPredicted RBP16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 LIN7CQ9NUP9 197 aaKnown RBP16.23■□□□□ 0.19
SMNDC1-201ENST00000369592 SAA2-SAA4A0A096LPE2 208 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 LINC01548A6NM66 108 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 NOTOA8MTQ0 251 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 SCTP09683 121 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 SAA2P0DJI9 122 aaPredicted RBP16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 SLC2A2P11168 524 aaPredicted RBP16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 OR3A3P47888 321 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 NSUN5P1Q3KNT7 163 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 FAM71F2Q6NXP2 309 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 TPRA1Q86W33 373 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 OR10R2Q8NGX6 335 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 S1PR3Q99500 378 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 CMSS1Q9BQ75 279 aaKnown RBP16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 MRPL20Q9BYC9 149 aaKnown RBP16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 OR51E2Q9H255 320 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 SLC23A1Q9UHI7 598 aa16.22■□□□□ 0.19
SMNDC1-201ENST00000369592 F2RL1P55085 397 aa16.21■□□□□ 0.19
SMNDC1-201ENST00000369592 C9orf152Q5JTZ5 239 aa16.21■□□□□ 0.19
SMNDC1-201ENST00000369592 OR2AK2Q8NG84 335 aa16.21■□□□□ 0.19
SMNDC1-201ENST00000369592 IL1F10Q8WWZ1 152 aa16.21■□□□□ 0.19
SMNDC1-201ENST00000369592 RAB3CQ96E17 227 aa16.21■□□□□ 0.19
SMNDC1-201ENST00000369592 PROP1O75360 226 aa16.2■□□□□ 0.18
SMNDC1-201ENST00000369592 SETD6Q8TBK2 473 aa16.2■□□□□ 0.18
SMNDC1-201ENST00000369592 RITA1Q96K30 269 aa16.2■□□□□ 0.18
SMNDC1-201ENST00000369592 NOL4LQ96MY1 436 aaPredicted RBP16.2■□□□□ 0.18
SMNDC1-201ENST00000369592 C11orf54Q9H0W9 315 aaPredicted RBP16.2■□□□□ 0.18
SMNDC1-201ENST00000369592 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMNDC1-201ENST00000369592 OR1A1Q9P1Q5 309 aa16.2■□□□□ 0.18
SMNDC1-201ENST00000369592 SSR3Q9UNL2 185 aa16.2■□□□□ 0.18
SMNDC1-201ENST00000369592 TRDCB7Z8K6 153 aa16.19■□□□□ 0.18
SMNDC1-201ENST00000369592 ST8SIA5O15466 376 aa16.19■□□□□ 0.18
SMNDC1-201ENST00000369592 HIST1H1DP16402 221 aaKnown RBP16.19■□□□□ 0.18
SMNDC1-201ENST00000369592 GPR12P47775 334 aa16.19■□□□□ 0.18
SMNDC1-201ENST00000369592 SLC35E3Q7Z769 313 aa16.19■□□□□ 0.18
SMNDC1-201ENST00000369592 CHPT1Q8WUD6 406 aa16.19■□□□□ 0.18
SMNDC1-201ENST00000369592 GHITMQ9H3K2 345 aa16.19■□□□□ 0.18
SMNDC1-201ENST00000369592 PIPOXQ9P0Z9 390 aa16.19■□□□□ 0.18
SMNDC1-201ENST00000369592 TSSC4Q9Y5U2 329 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms