RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SERGEFQ9UGK8 458 aa9.09□□□□□ -0.95
PRDM1-201ENST00000369089 MCTS1Q9ULC4 181 aaKnown RBP9.09□□□□□ -0.95
PRDM1-201ENST00000369089 TP53BP1Q12888 1972 aaPredicted RBP9.09□□□□□ -0.95
PRDM1-201ENST00000369089 LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 A0A1W2PR48 441 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 C2orf72A6NCS6 295 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 SLC35E2P0CK97 266 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 MFAP4P55083 255 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 RPS15AP62244 130 aaKnown RBP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 RPS11P62280 158 aaKnown RBP eCLIP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 LINC00696Q6ZRV3 163 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 FBXL14Q8N1E6 418 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 OR10AC1Q8NH08 325 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 SLC25A43Q8WUT9 341 aaPredicted RBP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 PIGTQ969N2 578 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 MMABQ96EY8 250 aaPredicted RBP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 ABHD14BQ96IU4 210 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 APOOQ9BUR5 198 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 LRP12Q9Y561 859 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 CSN3P07498 182 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 C10orf126Q8N4M7 172 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 SELENOKQ9Y6D0 94 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 ZNF831Q5JPB2 1677 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 PAPPA2Q9BXP8 1791 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 TOMM40O96008 361 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 MFAP2P55001 183 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 DUSP2Q05923 314 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 MESP2Q0VG99 397 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 MMD2Q8IY49 270 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 CLEC1BQ9P126 229 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 LDB3O75112 727 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 SRSF6Q13247 344 aaKnown RBP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 EXOSC7Q15024 291 aaKnown RBP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 COA6Q5JTJ3 125 aaKnown RBP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 ANKRD37Q7Z713 158 aa9.08□□□□□ -0.96
PRDM1-201ENST00000369089 COA3Q9Y2R0 106 aaPredicted RBP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
PRDM1-201ENST00000369089 METTL12A8MUP2 240 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 OR8A1Q8NGG7 326 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 OR1K1Q8NGR3 316 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 OR4A16Q8NH70 328 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 APOBEC3DQ96AK3 386 aaPredicted RBP9.07□□□□□ -0.96
PRDM1-201ENST00000369089 LINC00470Q9BZP3 86 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 PRTFDC1Q9NRG1 225 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 SYNGR2O43760 224 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 SAP30O75446 220 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 TUSC2O75896 110 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 SLC35B1P78383 322 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 CEACAM21Q3KPI0 293 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 ADAMTSL5Q6ZMM2 481 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 WDR34Q96EX3 536 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 ZNF732B4DXR9 585 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 J3QR06 171 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 SNAI2O43623 268 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 SRSF10O75494 262 aaKnown RBP9.07□□□□□ -0.96
PRDM1-201ENST00000369089 EDDM3BP56851 147 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 RPL27P61353 136 aaKnown RBP9.07□□□□□ -0.96
PRDM1-201ENST00000369089 GAGE13Q4V321 117 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 OR8B12Q8NGG6 310 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 SLC25A40Q8TBP6 338 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 TMEM204Q9BSN7 226 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 PDFQ9HBH1 243 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 IL36BQ9NZH7 164 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 ANXA10Q9UJ72 324 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 TRIP11Q15643 1979 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 FAM231BA6NCW3 169 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 SERINC4A6NH21 518 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 BCL3P20749 454 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 WDR82Q6UXN9 313 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 Q6ZVH6 145 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 TCF23Q7RTU1 214 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 OR4X2Q8NGF9 303 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 PLPPR1Q8TBJ4 325 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 RPRMQ9NS64 109 aa9.07□□□□□ -0.96
PRDM1-201ENST00000369089 KIAA1217Q5T5P2 1943 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 TTC3P53804 2025 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 RER1O15258 196 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 SOCS1O15524 211 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 PSMB2P49721 201 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 GFRA1P56159 465 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 HHEXQ03014 270 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 OR10J3Q5JRS4 329 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 TMEM240Q5SV17 173 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 RFLNBQ8N5W9 214 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 LIN7CQ9NUP9 197 aaKnown RBP9.06□□□□□ -0.96
PRDM1-201ENST00000369089 ASCL4Q6XD76 172 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 PBOV1Q9GZY1 135 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 GP6Q9HCN6 339 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 KLHDC2Q9Y2U9 406 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 KCNE3Q9Y6H6 103 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 IGHV2-26A0A0B4J1V2 119 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 GAGE12JA6NER3 117 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 GAGE7O76087 117 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 GAGE12FP0CL80 117 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 GAGE12GP0CL81 117 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 GAGE12IP0CL82 117 aa9.06□□□□□ -0.96
PRDM1-201ENST00000369089 APOBEC1P41238 236 aaKnown RBP9.06□□□□□ -0.96
PRDM1-201ENST00000369089 GAGE4Q13068 117 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms