RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PECRQ9BY49 303 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 PLSCR3Q9NRY6 295 aa15.02■□□□□ -0
CKS1B-203ENST00000368439 RRP15Q9Y3B9 282 aaKnown RBP15.02■□□□□ -0
CKS1B-203ENST00000368439 IFITM5A6NNB3 132 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 TXNL1O43396 289 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 LANCL1O43813 399 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 NSUN5P1Q3KNT7 163 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 C9orf152Q5JTZ5 239 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 ZNF773Q6PK81 442 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 MOB1BQ7L9L4 216 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 CENPVQ7Z7K6 275 aaPredicted RBP15.01□□□□□ -0.01
CKS1B-203ENST00000368439 TGIF2LXQ8IUE1 241 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 OR2T10Q8NGZ9 312 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 FCGR1BQ92637 280 aa15.01□□□□□ -0.01
CKS1B-203ENST00000368439 RIMS4Q9H426 269 aaPredicted RBP15.01□□□□□ -0.01
CKS1B-203ENST00000368439 OPN1MWP04001 364 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 OPN1MW2P0DN77 364 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 OPN1MW3P0DN78 364 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 RAB3BP20337 219 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 MYL9P24844 172 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 PSMB9P28065 219 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 FGF9P31371 208 aaPredicted RBP15□□□□□ -0.01
CKS1B-203ENST00000368439 Q8N9W7 124 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 OR56B1Q8NGI3 324 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 CHMP1AQ9HD42 196 aaPredicted RBP15□□□□□ -0.01
CKS1B-203ENST00000368439 TXNL4BQ9NX01 149 aaKnown RBP15□□□□□ -0.01
CKS1B-203ENST00000368439 RAB22AQ9UL26 194 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 KCNK7Q9Y2U2 307 aa15□□□□□ -0.01
CKS1B-203ENST00000368439 PRKDCP78527 4128 aaKnown RBP14.99□□□□□ -0.01
CKS1B-203ENST00000368439 RGS11O94810 467 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 MOSP00540 346 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 IGHG2P01859 326 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 RANBP1P43487 201 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 DEFA6Q01524 100 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 LSAMPQ13449 338 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 MOGAT2Q3SYC2 334 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 ZNF833PQ6ZTB9 187 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 SETD6Q8TBK2 473 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 IFI27L2Q9H2X8 130 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 Q9N2K0 584 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 ABRACLQ9P1F3 81 aa14.99□□□□□ -0.01
CKS1B-203ENST00000368439 A0A0B4J203 849 aa14.98□□□□□ -0.01
CKS1B-203ENST00000368439 LINC01548A6NM66 108 aa14.98□□□□□ -0.01
CKS1B-203ENST00000368439 HLA-DRB3P79483 266 aa14.98□□□□□ -0.01
CKS1B-203ENST00000368439 IL1F10Q8WWZ1 152 aa14.98□□□□□ -0.01
CKS1B-203ENST00000368439 ZNF251Q9BRH9 671 aa14.98□□□□□ -0.01
CKS1B-203ENST00000368439 PARP12Q9H0J9 701 aaKnown RBP14.98□□□□□ -0.01
CKS1B-203ENST00000368439 C12orf4Q9NQ89 552 aa14.98□□□□□ -0.01
CKS1B-203ENST00000368439 STUB1Q9UNE7 303 aa14.98□□□□□ -0.01
CKS1B-203ENST00000368439 SAA2-SAA4A0A096LPE2 208 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 RAB27BO00194 218 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 SAA2P0DJI9 122 aaPredicted RBP14.97□□□□□ -0.01
CKS1B-203ENST00000368439 RAB6AP20340 208 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 OR3A3P47888 321 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 F2RL1P55085 397 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 FAM71E2Q8N5Q1 922 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 OR2AK2Q8NG84 335 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 NOL4LQ96MY1 436 aaPredicted RBP14.97□□□□□ -0.01
CKS1B-203ENST00000368439 S1PR3Q99500 378 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 NABP2Q9BQ15 211 aa14.97□□□□□ -0.01
CKS1B-203ENST00000368439 CMSS1Q9BQ75 279 aaKnown RBP14.97□□□□□ -0.01
CKS1B-203ENST00000368439 MRPL20Q9BYC9 149 aaKnown RBP14.97□□□□□ -0.01
CKS1B-203ENST00000368439 LIN7CQ9NUP9 197 aaKnown RBP14.97□□□□□ -0.01
CKS1B-203ENST00000368439 IGKV1-6A0A0C4DH72 117 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 SMIM30A4D0T7 59 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 NCBP2LA6PVI3 153 aaKnown RBP14.96□□□□□ -0.01
CKS1B-203ENST00000368439 ST8SIA5O15466 376 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 SCTP09683 121 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 SLC2A2P11168 524 aaPredicted RBP14.96□□□□□ -0.01
CKS1B-203ENST00000368439 KCTD21Q4G0X4 260 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 OR10R2Q8NGX6 335 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 PTX4Q96A99 478 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 R3HDM4Q96D70 268 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 AGMATQ9BSE5 352 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 ABCG5Q9H222 651 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 OR51E2Q9H255 320 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 OR1A1Q9P1Q5 309 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 SLC23A1Q9UHI7 598 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 MGAT4AQ9UM21 535 aa14.96□□□□□ -0.01
CKS1B-203ENST00000368439 DNAH3Q8TD57 4116 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 TCRBV4S1A1TA0A5B7 111 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 PSMB11A5LHX3 300 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 MFNGO00587 321 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 ITGB1BP1O14713 200 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 GPR12P47775 334 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 FAM71F2Q6NXP2 309 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 SLC35E3Q7Z769 313 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 ZNF329Q86UD4 541 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 OR4F17Q8NGA8 305 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 OR4X2Q8NGF9 303 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 OR8H1Q8NGG4 311 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 CHPT1Q8WUD6 406 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 RAB3CQ96E17 227 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 RITA1Q96K30 269 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 OR4F4Q96R69 305 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 LINC00527Q9UJ94 153 aa14.95□□□□□ -0.02
CKS1B-203ENST00000368439 TSSC4Q9Y5U2 329 aaPredicted RBP14.95□□□□□ -0.02
CKS1B-203ENST00000368439 A0A1W2PRX2 142 aa14.94□□□□□ -0.02
CKS1B-203ENST00000368439 NOTOA8MTQ0 251 aa14.94□□□□□ -0.02
CKS1B-203ENST00000368439 SERPINE3A8MV23 424 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms