RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZNF833PQ6ZTB9 187 aa12.46□□□□□ -0.41
CKS1B-202ENST00000368436 NKAIN3Q8N8D7 197 aa12.46□□□□□ -0.41
CKS1B-202ENST00000368436 CYGBQ8WWM9 190 aa12.46□□□□□ -0.41
CKS1B-202ENST00000368436 MRPL20Q9BYC9 149 aaKnown RBP12.46□□□□□ -0.41
CKS1B-202ENST00000368436 GNB4Q9HAV0 340 aa12.46□□□□□ -0.41
CKS1B-202ENST00000368436 VSIG4Q9Y279 399 aa12.46□□□□□ -0.41
CKS1B-202ENST00000368436 LRRC42Q9Y546 428 aa12.46□□□□□ -0.41
CKS1B-202ENST00000368436 WSB1Q9Y6I7 421 aa12.46□□□□□ -0.41
CKS1B-202ENST00000368436 IGHV7-81A0A0B4J1V7 117 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 PNMA8CA0A1B0GUJ8 204 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 ATP6V0E1O15342 81 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 CELP19835 753 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 PPP1CCP36873 323 aaKnown RBP12.45□□□□□ -0.42
CKS1B-202ENST00000368436 INSL3P51460 131 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 LRRC36Q1X8D7 754 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 C5orf64Q2M2E5 130 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 LAIR2Q6ISS4 152 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 TMEM65Q6PI78 240 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 DHRSXQ8N5I4 330 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 PACRGLQ8N7B6 248 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 NPBQ8NG41 125 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 OR1N2Q8NGR9 330 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 THRSPQ92748 146 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 ZNF251Q9BRH9 671 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 ANKRD60Q9BZ19 345 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 C8orf4Q9NR00 106 aa12.45□□□□□ -0.42
CKS1B-202ENST00000368436 CNOT2Q9NZN8 540 aaKnown RBP12.45□□□□□ -0.42
CKS1B-202ENST00000368436 ZNF256Q9Y2P7 627 aaPredicted RBP12.45□□□□□ -0.42
CKS1B-202ENST00000368436 TRAV41A0A0B4J266 112 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 NBR2O15453 112 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 RGS11O94810 467 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 NDUFA3O95167 84 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 OR8U8P0C7N1 319 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 OR3A3P47888 321 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 RAB9AP51151 201 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 WNT4P56705 351 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 ZNF616Q08AN1 781 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 HMGN3Q15651 99 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 LIN54Q6MZP7 749 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 MINDY2Q8NBR6 621 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 FAM46BQ96A09 425 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 GALMQ96C23 342 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 SULT4A1Q9BR01 284 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 CST11Q9H112 138 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 PARP11Q9NR21 331 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 PSORS1C1Q9UIG5 152 aa12.44□□□□□ -0.42
CKS1B-202ENST00000368436 SAA2-SAA4A0A096LPE2 208 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 UBBP0CG47 229 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 SAA2P0DJI9 122 aaPredicted RBP12.43□□□□□ -0.42
CKS1B-202ENST00000368436 MAPK3P27361 379 aaPredicted RBP12.43□□□□□ -0.42
CKS1B-202ENST00000368436 CHATP28329 748 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 BLVRBP30043 206 aaPredicted RBP12.43□□□□□ -0.42
CKS1B-202ENST00000368436 GNB1P62873 340 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 C19orf54Q5BKX5 351 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 FAM71F2Q6NXP2 309 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 NANOGP1Q8N7R0 232 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 FBLIM1Q8WUP2 373 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 ASCL2Q99929 193 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 IFI27L2Q9H2X8 130 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 SORL1Q92673 2214 aa12.43□□□□□ -0.42
CKS1B-202ENST00000368436 CRIP2P52943 208 aaPredicted RBP12.42□□□□□ -0.42
CKS1B-202ENST00000368436 C1orf100Q5SVJ3 147 aa12.42□□□□□ -0.42
CKS1B-202ENST00000368436 OR2AK2Q8NG84 335 aa12.42□□□□□ -0.42
CKS1B-202ENST00000368436 NEDD4LQ96PU5 975 aa12.42□□□□□ -0.42
CKS1B-202ENST00000368436 FAAP24Q9BTP7 215 aa12.42□□□□□ -0.42
CKS1B-202ENST00000368436 EBAG9O00559 213 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 MYL12BO14950 172 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 CD37P11049 281 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 RPS27AP62979 156 aaKnown RBP12.41□□□□□ -0.42
CKS1B-202ENST00000368436 ZNF660Q6AZW8 331 aaPredicted RBP12.41□□□□□ -0.42
CKS1B-202ENST00000368436 OR10K2Q6IF99 312 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 ZNF880Q6PDB4 577 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 AHSA2Q719I0 299 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 LRRTM1Q86UE6 522 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 ZNF429Q86V71 674 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 DCUN1D4Q92564 292 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 OR5B12Q96R08 314 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 TM2D1Q9BX74 207 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 FKBP14Q9NWM8 211 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 PIPOXQ9P0Z9 390 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 ABRACLQ9P1F3 81 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 KIAA1456Q9P272 454 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 FBXO7Q9Y3I1 522 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 SMAD5-AS1Q9Y6J3 95 aa12.41□□□□□ -0.42
CKS1B-202ENST00000368436 HUWE1Q7Z6Z7 4374 aaKnown RBP12.4□□□□□ -0.42
CKS1B-202ENST00000368436 OVOL1O14753 267 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 RAB29O14966 203 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 SOX15O60248 233 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 NAPSAO96009 420 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 GNAO1P09471 354 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 HTR2CP28335 458 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 NDPQ00604 133 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 INSL4Q14641 139 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 ACSM3Q53FZ2 586 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 FAM131AQ6UXB0 335 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 C6orf201Q7Z4U5 140 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 C8orf59Q8N0T1 100 aaPredicted RBP12.4□□□□□ -0.42
CKS1B-202ENST00000368436 SVOPQ8N4V2 548 aa12.4□□□□□ -0.42
CKS1B-202ENST00000368436 MS4A15Q8N5U1 240 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms