RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ZNF322Q6U7Q0 402 aaPredicted RBP1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 ATP6V1C2Q8NEY4 427 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 TNFAIP8L1Q8WVP5 186 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 CAPZA3Q96KX2 299 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 UPK3BQ9BT76 320 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 UGT2B28Q9BY64 529 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 TMEM216Q9P0N5 145 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 LINC00527Q9UJ94 153 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 HEY1Q9Y5J3 304 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 CHD5Q8TDI0 1954 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 SORL1Q92673 2214 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 PLXNA3P51805 1871 aa1.35□□□□□ -2.19
ECHDC1-201ENST00000368287 COL11A1P12107 1806 aaPredicted RBP1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 F8VZ95 297 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 H3BSA7 217 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 M0QYV0 167 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 ARL6IP5O75915 188 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 FBP1P09467 338 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 OR13C7P0DN81 318 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 ZNF7P17097 686 aaPredicted RBP1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 BLVRBP30043 206 aaPredicted RBP1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 DAPP51397 102 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 PDK2Q15119 407 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 MRPL51Q4U2R6 128 aaKnown RBP1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 SPIN4Q56A73 249 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 FAM45BPQ6NSW5 357 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 OR5AK3PQ8NH89 298 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 OR5K1Q8NHB7 308 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 UPF3BQ9BZI7 483 aaKnown RBP1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 LRRC19Q9H756 370 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 EURLQ9NYK6 297 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 CD300AQ9UGN4 299 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 CFAP45Q9UL16 551 aa1.34□□□□□ -2.19
ECHDC1-201ENST00000368287 PLCH2O75038 1416 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 GBF1Q92538 1859 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 A0A0J9YX75 114 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 FABP12A6NFH5 140 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 METTL15A6NJ78 407 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 TOX3O15405 576 aaPredicted RBP1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 CYTH3O43739 400 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 LY6HO94772 140 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 OR4A8P0C604 315 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 P0DMU3 169 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 FAM231AP0DMU4 169 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 FAM231CP0DMU5 169 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 IGHV3-30-3P0DP02 117 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 CPMP14384 443 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 GABRA4P48169 554 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 SMAGPQ0VAQ4 97 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 SS18Q15532 418 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 PLCZ1Q86YW0 608 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 OR4K13Q8NH42 304 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 GPR119Q8TDV5 335 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 PPWD1Q96BP3 646 aaKnown RBP1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 PPCDCQ96CD2 204 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 ACY3Q96HD9 319 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 TRNT1Q96Q11 434 aaKnown RBP1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 ZNF251Q9BRH9 671 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 TMEM208Q9BTX3 173 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 MED18Q9BUE0 208 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 GNB1LQ9BYB4 327 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 NDEL1Q9GZM8 345 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 C11orf1Q9H5F2 150 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 TMEM106BQ9NUM4 274 aa1.33□□□□□ -2.2
ECHDC1-201ENST00000368287 TRGV4A0A0C4DH28 118 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 LIN7AO14910 233 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 ATP6V1G2O95670 118 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 ORM1P02763 201 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 ESDP10768 282 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 CDK2P24941 298 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 PSMB6P28072 239 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 HSPA9P38646 679 aaKnown RBP1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 OR1E2P47887 323 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 UBE2G2P60604 165 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 SLC13A5Q86YT5 568 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 FUNDC1Q8IVP5 155 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 LFNGQ8NES3 379 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 OR11H1Q8NG94 326 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 OR7G1Q8NGA0 311 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 OR5L1Q8NGL2 311 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 LRRC45Q96CN5 670 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 ZNF514Q96K75 400 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 MED28Q9H204 178 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 SMDT1Q9H4I9 107 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 WDR54Q9H977 334 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 GLS2Q9UI32 602 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 DNAJC12Q9UKB3 198 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 GMEB1Q9Y692 573 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 PTPRJQ12913 1337 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 NCKAP5O14513 1909 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 COL4A2P08572 1712 aa1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 COL5A3P25940 1745 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-201ENST00000368287 MDFIC2A0A1B0GVS7 189 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 TMEM213A2RRL7 107 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 FTCDNL1E5RQL4 147 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 GOLGA8RI6L899 631 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 AZIN1O14977 448 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 ZW10O43264 779 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 CALUO43852 315 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms