RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TIMM9Q9Y5J7 89 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 KLF3P57682 345 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 ISLRO14498 428 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 PMCHP20382 165 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 DDTP30046 118 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 STUMQ69YW2 141 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 BTNL3Q6UXE8 466 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR2Z1Q8NG97 314 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 NHLH2Q02577 135 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 INO80CQ6PI98 192 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 HELTA6NFD8 242 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 F12P00748 615 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 F8VVB4 439 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 F8VWA3 439 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 CCL11P51671 97 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 KCNMB1Q16558 191 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 PRO1933Q9H354 126 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 IGHV5-10-1A0A0J9YXX1 117 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 PCNX3Q9H6A9 2034 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 VENTXO95231 258 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 HFEQ30201 348 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 LRP11Q86VZ4 500 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 LRRC75AQ8NAA5 344 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 HIST1H2BAQ96A08 127 aa10.24□□□□□ -0.77
CDC42BPA-202ENST00000366764 CCL3P10147 92 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 TMEM255AQ5JRV8 349 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 UCN2Q96RP3 112 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 AUP1Q9Y679 476 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 TRBV9A0A0B4J1U6 114 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 EIF3GO75821 320 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 TCAPO15273 167 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 FUT9Q9Y231 359 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 MED19A0JLT2 244 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 FAM122AQ96E09 287 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 LOC102723971A0A1B0GUV8 181 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 UBE2L3P68036 154 aaKnown RBP10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 FBXW9Q5XUX1 488 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 TEX50A0A1B0GTY4 177 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 NPY1RP25929 384 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 RND3P61587 244 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 TEPPQ6URK8 271 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 CRIPAKQ8N1N5 446 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 CD82P27701 267 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 GYPAP02724 150 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 RPLP1P05386 114 aaKnown RBP10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 CD99P14209 185 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 UNC119Q13432 240 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 TMEM30BQ3MIR4 351 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 GTF2H5Q6ZYL4 71 aa10.23□□□□□ -0.77
CDC42BPA-202ENST00000366764 IGSF23A1L1A6 192 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 MEOX1P50221 254 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 B2MP61769 119 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 TMEM187Q14656 261 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 C16orf82Q7Z2V1 217 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 SGMS2Q8NHU3 365 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 AICDAQ9GZX7 198 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 M0R1B8 84 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 HLA-DQA1P01909 254 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 PSG2P11465 335 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 PDPNQ86YL7 162 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 MRGPRDQ8TDS7 321 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 G0S2P27469 103 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 LRRC29Q8WV35 223 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 CLEC12BQ2HXU8 276 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 IL19Q9UHD0 177 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 ZNF835Q9Y2P0 537 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 ARL2-SNX15V9GYD0 113 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 HCFC1P51610 2035 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 LYG1Q8N1E2 194 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 ADRA2AP08913 450 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 ZNF506Q5JVG8 444 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 COL5A1-AS1Q5SY13 56 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 Q6ZN92 141 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR4B1Q8NGF8 309 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 IGKV3D-11A0A0A0MRZ8 115 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 H0Y8G0 127 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 HIST1H1EP10412 219 aaKnown RBP10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 NACAE9PAV3 2078 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 LCN2P80188 198 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 PDCD1Q15116 288 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 C19orf24Q9BVV8 132 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 TMEM191AQ9H0A3 160 aa10.22□□□□□ -0.77
CDC42BPA-202ENST00000366764 PRR27Q6MZM9 219 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 RNASEKQ6P5S7 137 aaKnown RBP10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR2T6Q8NHC8 308 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 ERVS71-1P61550 626 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 LRRC3CA6NJW4 275 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 HPRT1P00492 218 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 IGLV3-19P01714 112 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 HLA-DRB5Q30154 266 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 PLAC9Q5JTB6 97 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 MED13Q9UHV7 2174 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 TNFSF15O95150 251 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 EFEMP2O95967 443 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 OPRK1P41145 380 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR1P1Q8NH06 330 aa10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 HDHD3Q9BSH5 251 aaPredicted RBP10.21□□□□□ -0.77
CDC42BPA-202ENST00000366764 TRBV6-7A0A0A0MS04 114 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms