RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CSN3P07498 182 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 AUP1Q9Y679 476 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 SRSF10O75494 262 aaKnown RBP8.47□□□□□ -1.05
CUX1-203ENST00000360264 TMEM251Q8N6I4 163 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 CDIPTO14735 213 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 ZNF683Q8IZ20 524 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 SIRT5Q9NXA8 310 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 A0A0U1RQV5 110 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 AP4M1O00189 453 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 OGG1O15527 345 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 HERPUD1Q15011 391 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 IL22RA2Q969J5 263 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 MRAP2Q96G30 205 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 PLA2G2FQ9BZM2 168 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 TNRC6CQ9HCJ0 1690 aaKnown RBP8.47□□□□□ -1.05
CUX1-203ENST00000360264 PPYP01298 95 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 TMPRSS3P57727 454 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 RAB32Q13637 225 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 H3BVH4 76 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 LOXL3P58215 753 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 FAM24BQ8N5W8 94 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 OR2D3Q8NGH3 330 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 GBF1Q92538 1859 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 MGST3O14880 152 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 MRGPRFQ96AM1 343 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 NEU3Q9UQ49 428 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 IGHV5-10-1A0A0J9YXX1 117 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 LMX1BO60663 402 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 MYF5P13349 255 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 PRSS8Q16651 343 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 SAMD13Q5VXD3 122 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 SH2D5Q6ZV89 423 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 SPOCK3Q9BQ16 436 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 GPR35Q9HC97 309 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 TNFRSF12AQ9NP84 129 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 ZNF236Q9UL36 1845 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 PLXND1Q9Y4D7 1925 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 J3KRW8 73 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 ERVS71-1P61550 626 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 PLPPR5Q32ZL2 321 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 ZNF430Q9H8G1 570 aaPredicted RBP8.47□□□□□ -1.05
CUX1-203ENST00000360264 PGFP49763 221 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 GLCCI1Q86VQ1 547 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 ALX4Q9H161 411 aaPredicted RBP8.47□□□□□ -1.05
CUX1-203ENST00000360264 LPAR2Q9HBW0 351 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 ARHGAP21Q5T5U3 1957 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 MAGEA5P43359 124 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 KLF9Q13886 244 aaPredicted RBP8.47□□□□□ -1.05
CUX1-203ENST00000360264 CEACAM21Q3KPI0 293 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 FAM53AQ6NSI3 398 aaPredicted RBP8.47□□□□□ -1.05
CUX1-203ENST00000360264 GAPTQ8N292 157 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 SMRP1Q8NCR6 262 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 ABHD14BQ96IU4 210 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 FN1P02751 2386 aaKnown RBP8.47□□□□□ -1.05
CUX1-203ENST00000360264 LCTP09848 1927 aa8.47□□□□□ -1.05
CUX1-203ENST00000360264 XIRP1Q702N8 1843 aaKnown RBP8.46□□□□□ -1.05
CUX1-203ENST00000360264 EML2O95834 649 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 ATP5IP56385 69 aaPredicted RBP8.46□□□□□ -1.05
CUX1-203ENST00000360264 ST3GAL2Q16842 350 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 CXorf66Q5JRM2 361 aaPredicted RBP8.46□□□□□ -1.05
CUX1-203ENST00000360264 HCFC1P51610 2035 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 STAG3L3P0CL85 134 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 DTD1Q8TEA8 209 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 RHNO1Q9BSD3 238 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 MRM2Q9UI43 246 aaKnown RBP8.46□□□□□ -1.05
CUX1-203ENST00000360264 NUTF2P61970 127 aaKnown RBP8.46□□□□□ -1.05
CUX1-203ENST00000360264 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.05
CUX1-203ENST00000360264 C1orf185Q5T7R7 199 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 PRNTQ86SH4 94 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 GCSAMQ8N6F7 178 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 PRDM14Q9GZV8 571 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 CTDSPLO15194 276 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 GAPDHP04406 335 aaKnown RBP8.46□□□□□ -1.05
CUX1-203ENST00000360264 OTPQ5XKR4 325 aa8.46□□□□□ -1.05
CUX1-203ENST00000360264 CHST1O43916 411 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 LIFP15018 202 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 DLK1P80370 383 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 OR52M1Q8NGK5 317 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 DDB2Q92466 427 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 PPP1R17O96001 155 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 TMEM50BP56557 158 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 SBK3P0C264 359 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 GPR6P46095 362 aaPredicted RBP8.46□□□□□ -1.06
CUX1-203ENST00000360264 C10orf128Q5T292 105 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 TWIST1Q15672 202 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 KIR2DL4Q99706 377 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 PARP14Q460N5 1801 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 RD3LP0DJH9 198 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 SELENOPP49908 381 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 TMEM33P57088 247 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 TMEM92Q6UXU6 159 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 R3HDMLQ9H3Y0 253 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 TINAGQ9UJW2 476 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 RAXQ9Y2V3 346 aa8.46□□□□□ -1.06
CUX1-203ENST00000360264 IGHV3-13P01766 116 aa8.45□□□□□ -1.06
CUX1-203ENST00000360264 IGHV3-7P01780 117 aa8.45□□□□□ -1.06
CUX1-203ENST00000360264 SGK494Q96LW2 274 aa8.45□□□□□ -1.06
CUX1-203ENST00000360264 SPINK9Q5DT21 86 aa8.45□□□□□ -1.06
CUX1-203ENST00000360264 ALKBH7Q9BT30 221 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms