RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 MRPL30Q8TCC3 161 aaKnown RBP9.52□□□□□ -0.89
SSU72-202ENST00000359060 SMIM8Q96KF7 97 aa9.52□□□□□ -0.89
SSU72-202ENST00000359060 ATP5SQ99766 215 aa9.52□□□□□ -0.89
SSU72-202ENST00000359060 USF3Q68DE3 2245 aa9.52□□□□□ -0.89
SSU72-202ENST00000359060 INTS1Q8N201 2190 aaKnown RBP9.52□□□□□ -0.89
SSU72-202ENST00000359060 FCGR3BO75015 233 aa9.52□□□□□ -0.89
SSU72-202ENST00000359060 DANCRP0C864 163 aa9.52□□□□□ -0.89
SSU72-202ENST00000359060 ABHD14BQ96IU4 210 aa9.52□□□□□ -0.89
SSU72-202ENST00000359060 GFOD1Q9NXC2 390 aa9.52□□□□□ -0.89
SSU72-202ENST00000359060 RFNGQ9Y644 331 aa9.52□□□□□ -0.89
SSU72-202ENST00000359060 IGHV3OR15-7A0A075B7D8 119 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 A0A1W2PPE2 198 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 SMPD2O60906 423 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 NDUFB7P17568 137 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 ADIRFQ15847 76 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 C18orf12Q96KH6 178 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 WFDC1Q9HC57 220 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 PLSCR2Q9NRY7 297 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 TP53TG5Q9Y2B4 290 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 A0A1B0GU03 582 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 hCG_1809904A0A1W2PP81 198 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 A0A1W2PR64 198 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 A0A1W2PRV1 198 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 ZNF891A8MT65 544 aaPredicted RBP9.51□□□□□ -0.89
SSU72-202ENST00000359060 ST8SIA5O15466 376 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 SPP1P10451 314 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 SULT1A1P50225 295 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 ZNF429Q86V71 674 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 WFDC8Q8IUA0 241 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 OR5D13Q8NGL4 314 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 RPUSD4Q96CM3 377 aaKnown RBP9.51□□□□□ -0.89
SSU72-202ENST00000359060 RARRES2Q99969 163 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
SSU72-202ENST00000359060 PITX3O75364 302 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 FAM157CP0CG43 387 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 MPV17P39210 176 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 RAB13P51153 203 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 SNRPEP62304 92 aaKnown RBP9.51□□□□□ -0.89
SSU72-202ENST00000359060 BHLHA15Q7RTS1 189 aaPredicted RBP9.51□□□□□ -0.89
SSU72-202ENST00000359060 PLPPR1Q8TBJ4 325 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 OR5B12Q96R08 314 aa9.51□□□□□ -0.89
SSU72-202ENST00000359060 HBZP02008 142 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 UCP1P25874 307 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 HOXA1P49639 335 aaPredicted RBP9.5□□□□□ -0.89
SSU72-202ENST00000359060 ASCL4Q6XD76 172 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 RBMS3Q6XE24 437 aaKnown RBP9.5□□□□□ -0.89
SSU72-202ENST00000359060 ABHD14AQ9BUJ0 271 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.5□□□□□ -0.89
SSU72-202ENST00000359060 FOXI3A8MTJ6 420 aaPredicted RBP9.5□□□□□ -0.89
SSU72-202ENST00000359060 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 CLEC12BQ2HXU8 276 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 Q6ZT83 130 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 EDARADDQ8WWZ3 215 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 OR51I2Q9H344 312 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 ABCA1O95477 2261 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 A0A0U1RQK1 487 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 FGF7P21781 194 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 SNCAP37840 140 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 COL10A1Q03692 680 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 EIF2S3LQ2VIR3 472 aaKnown RBP9.5□□□□□ -0.89
SSU72-202ENST00000359060 COLCA1Q6ZS62 124 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 MOGAT3Q86VF5 341 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 CLN8Q9UBY8 286 aa9.5□□□□□ -0.89
SSU72-202ENST00000359060 DUXBA0A1W2PPF3 345 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 OOEPA6NGQ2 149 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 S100PP25815 95 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 GLIPR1P48060 266 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 KIAA0141Q14154 515 aaPredicted RBP9.49□□□□□ -0.89
SSU72-202ENST00000359060 C20orf204Q6ZNR8 217 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 MDS2Q8NDY4 140 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 SLC25A22Q9H936 323 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 BARX1Q9HBU1 254 aaPredicted RBP9.49□□□□□ -0.89
SSU72-202ENST00000359060 PIEZO2Q9H5I5 2752 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 ZGRF1Q86YA3 2104 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 AKAP6Q13023 2319 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 MED13LQ71F56 2210 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 BTBD17A6NE02 478 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 NAPSAO96009 420 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 FGFRL1Q8N441 504 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 DRAM1Q8N682 238 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 C9orf106Q8NAJ2 232 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 OR8G5Q8NG78 346 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 C12orf57Q99622 126 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 HIPK2Q9H2X6 1198 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 VPS13AQ96RL7 3174 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 A0A1W2PNU3 283 aaPredicted RBP9.49□□□□□ -0.89
SSU72-202ENST00000359060 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 CD82P27701 267 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 NDUFA6P56556 154 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 H1FXQ92522 213 aaKnown RBP9.49□□□□□ -0.89
SSU72-202ENST00000359060 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 OR8U8P0C7N1 319 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 SSTR5P35346 364 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 PSMB3P49720 205 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 KLF3P57682 345 aaPredicted RBP9.49□□□□□ -0.89
SSU72-202ENST00000359060 GABRA6Q16445 453 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 BTNL8Q6UX41 500 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 S1PR3Q99500 378 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
SSU72-202ENST00000359060 A0A1W2PPE3 182 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms