RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FAM53AQ6NSI3 398 aaPredicted RBP11.21□□□□□ -0.62
SMC4-202ENST00000357388 SHISA8B8ZZ34 492 aa11.21□□□□□ -0.62
SMC4-202ENST00000357388 EDIL3O43854 480 aa11.21□□□□□ -0.62
SMC4-202ENST00000357388 VENTXO95231 258 aa11.21□□□□□ -0.62
SMC4-202ENST00000357388 RPS4XP62701 263 aaKnown RBP11.21□□□□□ -0.62
SMC4-202ENST00000357388 NHLRC3Q5JS37 347 aa11.21□□□□□ -0.62
SMC4-202ENST00000357388 TCF23Q7RTU1 214 aa11.21□□□□□ -0.62
SMC4-202ENST00000357388 ATG4DQ86TL0 474 aaPredicted RBP11.21□□□□□ -0.62
SMC4-202ENST00000357388 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.62
SMC4-202ENST00000357388 HSPB7Q9UBY9 170 aa11.21□□□□□ -0.62
SMC4-202ENST00000357388 RAXQ9Y2V3 346 aa11.21□□□□□ -0.62
SMC4-202ENST00000357388 HKR1P10072 659 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 LCN2P80188 198 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 QTRT1Q9BXR0 403 aaKnown RBP11.2□□□□□ -0.62
SMC4-202ENST00000357388 ST6GALNAC2Q9UJ37 374 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 WNT5AP41221 380 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 PTPRZ1P23471 2315 aaPredicted RBP11.2□□□□□ -0.62
SMC4-202ENST00000357388 LAMB4A4D0S4 1761 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 ZNF729A6NN14 1252 aaPredicted RBP11.2□□□□□ -0.62
SMC4-202ENST00000357388 TMPRSS2O15393 492 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 MOSPD3O75425 235 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 MDKP21741 143 aaPredicted RBP11.2□□□□□ -0.62
SMC4-202ENST00000357388 SRIP30626 198 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 ARF6P62330 175 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 CYB5R2Q6BCY4 276 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 C1orf174Q8IYL3 243 aa11.2□□□□□ -0.62
SMC4-202ENST00000357388 PNLIPP16233 465 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 GALNT14Q96FL9 552 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 TMUB1Q9BVT8 246 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 SFXN3Q9BWM7 321 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 JKAMPQ9P055 326 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 AHDC1Q5TGY3 1603 aaPredicted RBP11.19□□□□□ -0.62
SMC4-202ENST00000357388 CFDP00746 253 aaPredicted RBP11.19□□□□□ -0.62
SMC4-202ENST00000357388 CTAG1AP78358 180 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 ZIC1Q15915 447 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 HMGCLL1Q8TB92 370 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 TLNRD1Q9H1K6 362 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 C11orf68Q9H3H3 251 aaKnown RBP11.19□□□□□ -0.62
SMC4-202ENST00000357388 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
SMC4-202ENST00000357388 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 TRBV23-1A0A0A0MS06 115 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 C16orf97H3BN30 126 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 UBE2L6O14933 153 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 GCM2O75603 506 aaPredicted RBP11.19□□□□□ -0.62
SMC4-202ENST00000357388 TNFSF10P50591 281 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 DMRTA1Q5VZB9 504 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 BEND2Q8NDZ0 799 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 SPSB4Q96A44 273 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 TMEM222Q9H0R3 208 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 AURKAIP1Q9NWT8 199 aaPredicted RBP11.19□□□□□ -0.62
SMC4-202ENST00000357388 RPS11P62280 158 aaKnown RBP eCLIP11.19□□□□□ -0.628e-17■■■■■ 578.9
SMC4-202ENST00000357388 STPG3Q8N7X2 389 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 TAF15Q92804 592 aaKnown RBP eCLIP11.19□□□□□ -0.627e-26■■■■□ 25.9
SMC4-202ENST00000357388 TMSB15BA0A087X1C1 80 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A10PA6NDY2 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A18PA6NE21 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A16PA6NEW6 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 DPRXA6NFQ7 191 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A20PA6NIJ5 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A8PA6NJQ4 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 LIPT2A6NK58 231 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A7PA6NKC0 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A22PA8MWA6 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A12PA8MX19 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A5PA8MXJ8 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A23PA8MXZ1 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A15PP0C7V4 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A13PP0C7W8 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A14PP0C7W9 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 FAM90A24PP0C7X0 464 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 PSG9Q00887 426 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 DCAF12L2Q5VW00 463 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 CLEC2AQ6UVW9 174 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 CLDN16Q9Y5I7 305 aa11.19□□□□□ -0.62
SMC4-202ENST00000357388 OR11H12B2RN74 326 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 CCL21O00585 134 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 DANCRP0C864 163 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 OR11H1Q8NG94 326 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 OR11H2Q8NH07 326 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
SMC4-202ENST00000357388 GSN-AS1Q9NRJ2 163 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 GPR132Q9UNW8 380 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 INSIG2Q9Y5U4 225 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 KDM3BQ7LBC6 1761 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 A0A1B0GWB2 263 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 FCGR3AP08637 254 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 SLC35B1P78383 322 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 SAPCD1Q5SSQ6 148 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 TRAV8-7A0A075B6U6 113 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 A0A1W2PRD5 423 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 A0A1W2PRF3 423 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 A0A1W2PRM7 423 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 LINC00869P0C866 280 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 ALKBH7Q9BT30 221 aaPredicted RBP11.18□□□□□ -0.62
SMC4-202ENST00000357388 MYO18AQ92614 2054 aaKnown RBP11.18□□□□□ -0.62
SMC4-202ENST00000357388 MPZL1O95297 269 aa11.18□□□□□ -0.62
SMC4-202ENST00000357388 EML2O95834 649 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms