RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 WDR13Q9H1Z4 485 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 PROCRQ9UNN8 238 aa5.77□□□□□ -1.49
VPS13B-202ENST00000357162 TCRBV16S1A1N1A0A5B0 115 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 ACAA2P42765 397 aaKnown RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 TBC1D26Q86UD7 250 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 ZADH2Q8N4Q0 377 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 RAB1BQ9H0U4 201 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 PLAC1Q9HBJ0 212 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 DYNLT3P51808 116 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 FZD5Q13467 585 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 PGLYRP3Q96LB9 341 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 PRO1933Q9H354 126 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 C17orf51A8MQB3 221 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 TMEM50BP56557 158 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 RPS16P62249 146 aaKnown RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 LDLRAD3Q86YD5 345 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SLC25A22Q9H936 323 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 ZNF835Q9Y2P0 537 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 NRG2O14511 850 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 TCF21O43680 179 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 CHST1O43916 411 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SOSTQ9BQB4 213 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 LPAR5Q9H1C0 372 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SMPXQ9UHP9 88 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 ERRFI1Q9UJM3 462 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 DENND4CQ5VZ89 1909 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 FNDC1Q4ZHG4 1894 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 MYADML2A6NDP7 307 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 NPIPB7O75200 414 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 PI3P19957 117 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SRSF7Q16629 238 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 FAM221AA4D161 298 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SRSF10O75494 262 aaKnown RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 MRPL38Q96DV4 380 aaKnown RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SLC25A5P05141 298 aaKnown RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 LSM11P83369 360 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 FGF22Q9HCT0 170 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 PLSCR2Q9NRY7 297 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 ST6GALNAC2Q9UJ37 374 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 HS3ST1O14792 307 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 TTC32Q5I0X7 151 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 LRTM2Q8N967 370 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 MYOZ3Q8TDC0 251 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 ADAT3Q96EY9 351 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 MMP17Q9ULZ9 603 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 TMEM202A6NGA9 273 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 RCC1P18754 421 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 IFITM2Q01629 132 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 PRICKLE4Q2TBC4 344 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 R3HDM4Q96D70 268 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SMOC1Q9H4F8 434 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 CEBPDP49716 269 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 OR1D5P58170 312 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 RPS4XP62701 263 aaKnown RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SCNM1Q9BWG6 230 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SPTY2D1-AS1A0A0U1RR47 76 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 ZIC2O95409 532 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 IAPPP10997 89 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 CFPP27918 469 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 CLDN18P56856 261 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 HBBP68871 147 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 KISS1RQ969F8 398 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-202ENST00000357162 SLC6A13Q9NSD5 602 aa5.76□□□□□ -1.49
VPS13B-202ENST00000357162 OR8B3Q8NGG8 313 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 CDC42EP2O14613 210 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 RAB29O14966 203 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 PRSS1P07477 247 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 B4GALNT1Q00973 533 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 ZNF793Q6ZN11 406 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 GATAD1Q8WUU5 269 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 GPR132Q9UNW8 380 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 TRAV38-1A0A0B4J264 116 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 MMP23AO75900 390 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 B3GALT4O96024 378 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 RELQ04864 619 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-202ENST00000357162 VASH2Q86V25 355 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 C5orf17Q8NAS9 161 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 ZNF519Q8TB69 540 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 VN1R1Q9GZP7 353 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 LY96Q9Y6Y9 160 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 LEPROTL1O95214 131 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 SRSF4Q08170 494 aaKnown RBP5.75□□□□□ -1.49
VPS13B-202ENST00000357162 APCDD1LQ8NCL9 501 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 RASL11BQ9BPW5 248 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 HSPB9Q9BQS6 159 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 KIAA1549Q9HCM3 1950 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 RNF222A6NCQ9 220 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 RD3LP0DJH9 198 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 TM4SF4P48230 202 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 DLX1P56177 255 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 FBXO46Q6PJ61 603 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-202ENST00000357162 TMEM136Q6ZRR5 245 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 D2HGDHQ8N465 521 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 COA4Q9NYJ1 87 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 C5orf49A4QMS7 147 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 CA2P00918 260 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 CLDN2P57739 230 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 FAM131CQ96AQ9 280 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 TRAV30A0A087WSZ9 112 aa5.75□□□□□ -1.49
VPS13B-202ENST00000357162 PRELID3AQ96N28 172 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms