RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 MGST3O14880 152 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 RPL27AP46776 148 aaKnown RBP4.83□□□□□ -1.64
PTPRD-202ENST00000356435 HLA-DRB5Q30154 266 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM37Q8WXS4 190 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 RSG1Q9BU20 258 aa4.83□□□□□ -1.64
PTPRD-202ENST00000356435 OR4C46A6NHA9 309 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 FOXH1O75593 365 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 COX6CP09669 75 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 TCL1AP56279 114 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 PMS2P11Q13670 270 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 C16orf47Q6ZP98 133 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-202ENST00000356435 LRP11Q86VZ4 500 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 OR2V2Q96R30 315 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 C12orf57Q99622 126 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 APC2O95996 2303 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 RBFOX3A6NFN3 312 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 BGLAPP02818 100 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 DRD3P35462 400 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 MVDP53602 400 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 RPS20P60866 119 aaKnown RBP4.82□□□□□ -1.64
PTPRD-202ENST00000356435 FAM74A3Q4VXF1 159 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 EEF1AKMT3Q96AZ1 226 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 GALNT14Q96FL9 552 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 RGPD4Q7Z3J3 1758 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 IGHV3-21A0A0B4J1V1 117 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 RSPO4Q2I0M5 234 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-202ENST00000356435 MMD2Q8IY49 270 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF107Q9UII5 783 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-202ENST00000356435 LOC105371242A0A075B767 164 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 A0A1W2PPE3 182 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 MPC2O95563 127 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 AESQ08117 197 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 C9orf40Q8IXQ3 194 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 ADAMTS17Q8TE56 1095 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 CDC42EP3Q9UKI2 254 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 MPDU1O75352 247 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM33P57088 247 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 LY6EQ16553 131 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM30BQ3MIR4 351 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 IGSF11Q5DX21 431 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM255AQ5JRV8 349 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 SEZ6L2Q6UXD5 910 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 BPIFA4PQ86YQ2 179 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 GUCD1Q96NT3 240 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 SDK1Q7Z5N4 2213 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 RGPD3A6NKT7 1758 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-202ENST00000356435 HPXP02790 462 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 SP9P0CG40 484 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 MRM2Q9UI43 246 aaKnown RBP4.82□□□□□ -1.64
PTPRD-202ENST00000356435 CLDN14O95500 239 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 PPYP01298 95 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 PGA4P0DJD7 388 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 PGA5P0DJD9 388 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 CEBPDP49716 269 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-202ENST00000356435 DCAF12L2Q5VW00 463 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 CENPVQ7Z7K6 275 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-202ENST00000356435 OR4X2Q8NGF9 303 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 OR2T10Q8NGZ9 312 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF502Q8TBZ5 544 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 YAE1D1Q9NRH1 226 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 CCL28Q9NRJ3 127 aa4.82□□□□□ -1.64
PTPRD-202ENST00000356435 PRR19A6NJB7 356 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 B4DEV8 164 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 RNASE1P07998 156 aaKnown RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 CT62P0C5K7 136 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 CIRBPQ14011 172 aaKnown RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 BSXQ3C1V8 233 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 OR2D3Q8NGH3 330 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM101Q96IK0 257 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 ABHD14BQ96IU4 210 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 MIA3Q5JRA6 1907 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 B9A039 149 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 THY1P04216 161 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 LGALS3P17931 250 aaKnown RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 COMPP49747 757 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 RBM11P57052 281 aaKnown RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 LBHQ53QV2 105 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 MRPL54Q6P161 138 aaKnown RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 CBLN3Q6UW01 205 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 RNF133Q8WVZ7 376 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 ZG16BQ96DA0 208 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM204Q9BSN7 226 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 TTC3P53804 2025 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 GON4LQ3T8J9 2241 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 PCM1Q15154 2024 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 TMSB15BA0A087X1C1 80 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 TRAV34A0A0B4J273 112 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 PPIAL4CA0A0B4J2A2 164 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 NPFFO15130 113 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 MPZL1O95297 269 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 PPIAL4GP0DN37 164 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 STARD6P59095 220 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 FAM27D1Q5T7N8 215 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF721Q8TF20 911 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 GPA33Q99795 319 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 PHLDA3Q9Y5J5 127 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 DICER1Q9UPY3 1922 aaKnown RBP4.81□□□□□ -1.64
PTPRD-202ENST00000356435 WNT5AP41221 380 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 UCP2P55851 309 aa4.81□□□□□ -1.64
PTPRD-202ENST00000356435 RPL8P62917 257 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms