RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 FGF12P61328 243 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 RPS16P62249 146 aaKnown RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 PMP22Q01453 160 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 SLC38A11Q08AI6 406 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 PRDX4Q13162 271 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 ACOT6Q3I5F7 207 aaPredicted RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 SLC23A3Q6PIS1 610 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 PCSK4Q6UW60 755 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 SGCZQ96LD1 299 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 MTCH1Q9NZJ7 389 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 OR1A1Q9P1Q5 309 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 SEMA5BQ9P283 1151 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 C19orf25Q9UFG5 118 aaPredicted RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 ZNF391Q9UJN7 358 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 KCNS2Q9ULS6 477 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 ZNF705FA8MVS1 300 aaPredicted RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 IGKV1-5P01602 117 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 CTXN2P0C2S0 81 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 ZNF705DP0CH99 300 aaPredicted RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 ZNF705BP0CI00 300 aaPredicted RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 DEFA4P12838 97 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 CNN1P51911 297 aaKnown RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 ERVFC1-1P60608 527 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 HLA-BQ31612 363 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 C9orf135Q5VTT2 229 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 CST9LP1Q5W188 147 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 WDR74Q6RFH5 385 aaPredicted RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 BTNL3Q6UXE8 466 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 ZNF705AQ6ZN79 300 aaPredicted RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 YRDCQ86U90 279 aaKnown RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 GBGT1Q8N5D6 347 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 FGF23Q9GZV9 251 aaPredicted RBP12.97□□□□□ -0.33
VAT1-201ENST00000355653 OR6C3Q9NZP0 311 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 IL17BQ9UHF5 180 aa12.97□□□□□ -0.33
VAT1-201ENST00000355653 VPS13AQ96RL7 3174 aa12.96□□□□□ -0.33
VAT1-201ENST00000355653 TRAPPC2LH3BP13 241 aa12.96□□□□□ -0.33
VAT1-201ENST00000355653 CLDN1O95832 211 aa12.96□□□□□ -0.33
VAT1-201ENST00000355653 CCKARP32238 428 aa12.96□□□□□ -0.33
VAT1-201ENST00000355653 RNPS1Q15287 305 aaKnown RBP12.96□□□□□ -0.33
VAT1-201ENST00000355653 FAM78BQ5VT40 261 aa12.96□□□□□ -0.33
VAT1-201ENST00000355653 ACSM6Q6P461 480 aa12.96□□□□□ -0.33
VAT1-201ENST00000355653 ZNF845Q96IR2 970 aaPredicted RBP12.96□□□□□ -0.33
VAT1-201ENST00000355653 RARRES3Q9UL19 164 aa12.96□□□□□ -0.33
VAT1-201ENST00000355653 POLR3KQ9Y2Y1 108 aaPredicted RBP12.96□□□□□ -0.33
VAT1-201ENST00000355653 A6NNC1 897 aa12.96□□□□□ -0.34
VAT1-201ENST00000355653 TDGF1P3P51864 188 aa12.96□□□□□ -0.34
VAT1-201ENST00000355653 TMEM256Q8N2U0 113 aa12.96□□□□□ -0.34
VAT1-201ENST00000355653 CPEB3Q8NE35 698 aaKnown RBP12.96□□□□□ -0.34
VAT1-201ENST00000355653 CPT1CQ8TCG5 803 aa12.96□□□□□ -0.34
VAT1-201ENST00000355653 PSMF1Q92530 271 aa12.96□□□□□ -0.34
VAT1-201ENST00000355653 TECTBQ96PL2 329 aa12.96□□□□□ -0.34
VAT1-201ENST00000355653 DOCK11Q5JSL3 2073 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 SYNGR1O43759 233 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 CD33P20138 364 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 ZNF324BQ6AW86 544 aaPredicted RBP12.95□□□□□ -0.34
VAT1-201ENST00000355653 C1QTNF9BB2RNN3 333 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 CXCL13O43927 109 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 GDF9O60383 454 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 PAGE4O60829 102 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 WDR1O75083 606 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 EGR1P18146 543 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 HOXA6P31267 233 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 RAC1P63000 192 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 RELQ04864 619 aaPredicted RBP12.95□□□□□ -0.34
VAT1-201ENST00000355653 KCNIP4Q6PIL6 250 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 NAGKQ9UJ70 344 aa12.95□□□□□ -0.34
VAT1-201ENST00000355653 ADAMTS20P59510 1910 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 A0A0U1RQK1 487 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 ZNF320A2RRD8 509 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A10PA6NDY2 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A18PA6NE21 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A16PA6NEW6 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A20PA6NIJ5 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A8PA6NJQ4 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A7PA6NKC0 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A22PA8MWA6 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A12PA8MX19 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A5PA8MXJ8 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A23PA8MXZ1 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 TMEM250H0YL14 139 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 MBP02144 154 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A15PP0C7V4 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A13PP0C7W8 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A14PP0C7W9 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 FAM90A24PP0C7X0 464 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 SLC25A6P12236 298 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 CARD18P57730 90 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 MLF1P58340 268 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 MKXQ8IYA7 352 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 OR10G9Q8NGN4 311 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 OR10G7Q8NGN6 311 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 ANAPC16Q96DE5 110 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 TRAPPC1Q9Y5R8 145 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 PDGFBP01127 241 aaPredicted RBP12.94□□□□□ -0.34
VAT1-201ENST00000355653 IL3RAP26951 378 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 C21orf62-AS1Q17RA5 79 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 KRTAP27-1Q3LI81 207 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 CISD2Q8N5K1 135 aaKnown RBP12.94□□□□□ -0.34
VAT1-201ENST00000355653 SDSLQ96GA7 329 aa12.94□□□□□ -0.34
VAT1-201ENST00000355653 PROK2Q9HC23 129 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms